G1705921


Basic Information

Item Value
gene id G1705921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9660511 ~ 9660789 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953593
AAATTATGCCTCCACCCTTACCCCCATCTGTCTAATGGTGTCATACTGAACTCCTAAACACTGCACAATGATGACACATTGATGTGTACAGGTTTATgaacacattgacacacacacggCCTTCTCCTCAACCACTCAGCAGGGTGGCTAGAAGTTAATCCCTGAGTGTTTATAAACAATAACCGTTAGCCAGATCAAACAATAGTGACGACACAGGACATAAAACACAGCCAGACGTCCAGTTAGGGCCATATCGGCTTTACAACACCCTGTTCTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953593 True 279 lncRNA 0.44 1 9660511 9660789

Neighbor

gene id symbol gene type direction distance location
LOC118936575 LOC106592244 coding upstream 247340 9402494 ~ 9413171 (+)
LOC118943004 LOC106591072 coding upstream 269469 9387717 ~ 9391585 (+)
LOC110507941 LOC106592244 coding upstream 306039 9336881 ~ 9354472 (+)
zgc:194209 LOC106591857 coding upstream 419172 9217225 ~ 9241339 (+)
LOC118942859 NA coding upstream 575953 9082796 ~ 9084558 (+)
LOC118942867 NA coding downstream 108801 9769444 ~ 9771487 (+)
LOC118942868 mkrn1 coding downstream 164061 9824762 ~ 9864743 (+)
LOC110516560 LOC106576660 coding downstream 207613 9868402 ~ 9870589 (+)
LOC118942870 NA coding downstream 320006 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 409687 10070476 ~ 10098024 (+)
G1705919 NA non-coding upstream 1340 9658892 ~ 9659171 (+)
G1705917 NA non-coding upstream 5899 9654375 ~ 9654612 (+)
G1705913 NA non-coding upstream 21218 9638689 ~ 9639293 (+)
G1705911 NA non-coding upstream 25157 9634547 ~ 9635354 (+)
G1705908 NA non-coding upstream 34523 9625708 ~ 9625988 (+)
G1705922 NA non-coding downstream 4270 9665059 ~ 9665338 (+)
G1706009 NA non-coding downstream 81109 9741898 ~ 9743489 (+)
G1706010 NA non-coding downstream 83886 9744675 ~ 9746142 (+)
G1706027 NA non-coding downstream 114961 9775750 ~ 9776626 (+)
G1705920 NA other upstream 371 9659331 ~ 9660140 (+)
G1705918 NA other upstream 4793 9655298 ~ 9655718 (+)
eps8a LOC106594571 other upstream 569106 8908286 ~ 9091490 (+)
G1705279 NA other upstream 647348 9011926 ~ 9013163 (+)
G1705267 NA other upstream 683946 8975304 ~ 8976565 (+)
G1706013 NA other downstream 87396 9748185 ~ 9753473 (+)
G1706090 NA other downstream 254924 9915713 ~ 9918019 (+)
G1706152 NA other downstream 473599 10134388 ~ 10135384 (+)
LOC110531908 LOC106594049 other downstream 1448639 11103180 ~ 11138813 (+)
G1706652 NA other downstream 1609940 11270729 ~ 11272473 (+)

Expression


Co-expression Network