G1706010


Basic Information

Item Value
gene id G1706010
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9744675 ~ 9746142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953732
AGTAGGGAGGattggatggaaggaaggaacagTATCTGACAGTAGGGAGGattggatggaaGGAAGGAACAGTATCTGACAGTGGGGAGGTTtagatggatggaaggagggaacAGTATCTGACAGTAGGGAGGattggatggaaggaaggaacagTATCTGACAGTAGGGAGGATTGGATGGAAGGAGGGAACAGTATCTGACAGTAGGGAGGattggatggaaggaaggaacagTATCTGACAGTAGGGAGGattggatggaaggaaggaacagTATCTGACAGTAGGGAGGattggatggaaggaacagTATCTGACAGTAGGGAGGattggatggaaggaaggagggaacaGTATCTGACAGTGGGGAGGATTAGATGTTTCACAAtctcacacagtctcacacagtcacagtctctcacagtctctcacagtctcacacagtctctcacagtcACTCACAGTCACTCACAGTCACTCAC
>TU1953733
AGTAGGGAGGattggatggaaggaaggaacagTATCTGACAGTAGGGAGGattggatggaaGGAAGGAACAGTATCTGACAGTGGGGAGGTTtagaTGGATGGAAGGAGGGAACAGTATCTGACAGTAGGGAGGattggatggaaggaaggaacagTATCTGACAGTAGGGAGGattggatggaaggaaggaacagTATCTGACAGTAGGGAGGattggatggaaggaaggaacagTATCTGACAGTAGGGAGGattggatggaaggaacagTATCTGACAGTAGGGAGGattggatggaaggaaggagggaacaGTATCTGACAGTGGGGAGGATTAGATGTTTCACAAtctcacacagtctcacacagtcacagtctctcacagtctctcacagtctcacacagtctctcacagtcACTCACAGTCACTCACAGTCACTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953732 False 484 lncRNA 0.48 3 9744675 9746142
TU1953733 True 444 lncRNA 0.48 4 9744675 9746142

Neighbor

gene id symbol gene type direction distance location
LOC118942866 LOC106576670 coding upstream 21689 9532104 ~ 9722986 (+)
LOC118936575 LOC106592244 coding upstream 331504 9402494 ~ 9413171 (+)
LOC118943004 LOC106591072 coding upstream 353633 9387717 ~ 9391585 (+)
LOC110507941 LOC106592244 coding upstream 390203 9336881 ~ 9354472 (+)
zgc:194209 LOC106591857 coding upstream 503336 9217225 ~ 9241339 (+)
LOC118942867 NA coding downstream 23448 9769444 ~ 9771487 (+)
LOC118942868 mkrn1 coding downstream 78708 9824762 ~ 9864743 (+)
LOC110516560 LOC106576660 coding downstream 122260 9868402 ~ 9870589 (+)
LOC118942870 NA coding downstream 234653 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 324334 10070476 ~ 10098024 (+)
G1706009 NA non-coding upstream 1186 9741898 ~ 9743489 (+)
G1705922 NA non-coding upstream 79337 9665059 ~ 9665338 (+)
G1705921 NA non-coding upstream 83886 9660511 ~ 9660789 (+)
G1705919 NA non-coding upstream 85504 9658892 ~ 9659171 (+)
G1705917 NA non-coding upstream 90063 9654375 ~ 9654612 (+)
G1706027 NA non-coding downstream 29608 9775750 ~ 9776626 (+)
G1706031 NA non-coding downstream 38181 9784323 ~ 9800209 (+)
G1706051 NA non-coding downstream 69066 9815208 ~ 9816642 (+)
G1706053 NA non-coding downstream 73749 9819891 ~ 9859774 (+)
G1705920 NA other upstream 84535 9659331 ~ 9660140 (+)
G1705918 NA other upstream 88957 9655298 ~ 9655718 (+)
eps8a LOC106594571 other upstream 653270 8908286 ~ 9091490 (+)
G1706013 NA other downstream 2043 9748185 ~ 9753473 (+)
G1706090 NA other downstream 169571 9915713 ~ 9918019 (+)
G1706152 NA other downstream 388246 10134388 ~ 10135384 (+)
LOC110531908 LOC106594049 other downstream 1363286 11103180 ~ 11138813 (+)
G1706652 NA other downstream 1524587 11270729 ~ 11272473 (+)

Expression


Co-expression Network