G1706027


Basic Information

Item Value
gene id G1706027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9775750 ~ 9776626 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953760
gagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgttgttaccagagcaggctattccccggtttcctgttgttaccagagcaggctattccccagtttcctgttgttcccagagcaggctattccccagtttcctgt

Function

NR:

description
proline-rich extensin-like protein EPR1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953760 True 740 lncRNA 0.52 2 9775750 9776626

Neighbor

gene id symbol gene type direction distance location
LOC118942867 NA coding upstream 5602 9769444 ~ 9771487 (+)
LOC118942866 LOC106576670 coding upstream 52764 9532104 ~ 9722986 (+)
LOC118936575 LOC106592244 coding upstream 362579 9402494 ~ 9413171 (+)
LOC118943004 LOC106591072 coding upstream 384708 9387717 ~ 9391585 (+)
LOC110507941 LOC106592244 coding upstream 421278 9336881 ~ 9354472 (+)
LOC118942868 mkrn1 coding downstream 48224 9824762 ~ 9864743 (+)
LOC110516560 LOC106576660 coding downstream 91776 9868402 ~ 9870589 (+)
LOC118942870 NA coding downstream 204169 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 293850 10070476 ~ 10098024 (+)
LOC110510583 LOC106597972 coding downstream 544566 10321192 ~ 10323104 (+)
G1706010 NA non-coding upstream 29608 9744675 ~ 9746142 (+)
G1706009 NA non-coding upstream 32261 9741898 ~ 9743489 (+)
G1705922 NA non-coding upstream 110412 9665059 ~ 9665338 (+)
G1705921 NA non-coding upstream 114961 9660511 ~ 9660789 (+)
G1706031 NA non-coding downstream 7697 9784323 ~ 9800209 (+)
G1706051 NA non-coding downstream 38582 9815208 ~ 9816642 (+)
G1706053 NA non-coding downstream 43265 9819891 ~ 9859774 (+)
G1706062 NA non-coding downstream 58633 9835259 ~ 9835795 (+)
G1706013 NA other upstream 22277 9748185 ~ 9753473 (+)
G1705920 NA other upstream 115610 9659331 ~ 9660140 (+)
G1705918 NA other upstream 120032 9655298 ~ 9655718 (+)
G1705279 NA other upstream 762587 9011926 ~ 9013163 (+)
G1705267 NA other upstream 799185 8975304 ~ 8976565 (+)
G1706090 NA other downstream 139087 9915713 ~ 9918019 (+)
G1706152 NA other downstream 357762 10134388 ~ 10135384 (+)
LOC110531908 LOC106594049 other downstream 1332802 11103180 ~ 11138813 (+)
G1706652 NA other downstream 1494103 11270729 ~ 11272473 (+)
G1706711 NA other downstream 1621414 11398040 ~ 11399288 (+)

Expression


Co-expression Network