Gene
RNA
| Item | Value |
|---|---|
| gene id | G1706053 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 9819891 ~ 9859774 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1953796 | False | 310 | lncRNA | 0.39 | 2 | 9819891 | 9859095 |
| TU1953797 | True | 393 | lncRNA | 0.38 | 3 | 9858682 | 9859774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942867 | NA | coding | upstream | 49743 | 9769444 ~ 9771487 (+) |
| LOC118942866 | LOC106576670 | coding | upstream | 96905 | 9532104 ~ 9722986 (+) |
| LOC118936575 | LOC106592244 | coding | upstream | 406720 | 9402494 ~ 9413171 (+) |
| LOC118943004 | LOC106591072 | coding | upstream | 428849 | 9387717 ~ 9391585 (+) |
| LOC110507941 | LOC106592244 | coding | upstream | 465419 | 9336881 ~ 9354472 (+) |
| LOC110516560 | LOC106576660 | coding | downstream | 8628 | 9868402 ~ 9870589 (+) |
| LOC118942870 | NA | coding | downstream | 121021 | 9980795 ~ 9981137 (+) |
| LOC118942996 | NA | coding | downstream | 210702 | 10070476 ~ 10098024 (+) |
| LOC110510583 | LOC106597972 | coding | downstream | 461418 | 10321192 ~ 10323104 (+) |
| LOC110490805 | LOC106591178 | coding | downstream | 663172 | 10522946 ~ 10699071 (+) |
| G1706051 | NA | non-coding | upstream | 3249 | 9815208 ~ 9816642 (+) |
| G1706031 | NA | non-coding | upstream | 19682 | 9784323 ~ 9800209 (+) |
| G1706027 | NA | non-coding | upstream | 43265 | 9775750 ~ 9776626 (+) |
| G1706010 | NA | non-coding | upstream | 73749 | 9744675 ~ 9746142 (+) |
| G1706082 | NA | non-coding | downstream | 28078 | 9887852 ~ 9888872 (+) |
| G1706086 | NA | non-coding | downstream | 36574 | 9896348 ~ 9896604 (+) |
| G1706087 | NA | non-coding | downstream | 47093 | 9906867 ~ 9907072 (+) |
| G1706095 | NA | non-coding | downstream | 67572 | 9927346 ~ 9927550 (+) |
| G1706096 | NA | non-coding | downstream | 71050 | 9930824 ~ 9931079 (+) |
| G1706013 | NA | other | upstream | 66418 | 9748185 ~ 9753473 (+) |
| G1705920 | NA | other | upstream | 159751 | 9659331 ~ 9660140 (+) |
| G1705918 | NA | other | upstream | 164173 | 9655298 ~ 9655718 (+) |
| G1705279 | NA | other | upstream | 806728 | 9011926 ~ 9013163 (+) |
| G1705267 | NA | other | upstream | 843326 | 8975304 ~ 8976565 (+) |
| G1706090 | NA | other | downstream | 55939 | 9915713 ~ 9918019 (+) |
| G1706152 | NA | other | downstream | 274614 | 10134388 ~ 10135384 (+) |
| LOC110531908 | LOC106594049 | other | downstream | 1249654 | 11103180 ~ 11138813 (+) |
| G1706652 | NA | other | downstream | 1410955 | 11270729 ~ 11272473 (+) |
| G1706711 | NA | other | downstream | 1538266 | 11398040 ~ 11399288 (+) |
