G1706087


Basic Information

Item Value
gene id G1706087
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9906867 ~ 9907072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953856
ggtcaaatggcaccctattctctggtcaactggaaccctattctctggtcaaatggcaccctattctctggtcaaatggaaccctattctctggtcaaatggaaccctattctctggtcaaatggaaccctattctctggtcaaatggcaccctattccctagtcaaatggaaccctattctctggtcaaatggaaccctattctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953856 True 206 lncRNA 0.46 1 9906867 9907072

Neighbor

gene id symbol gene type direction distance location
LOC110516560 LOC106576660 coding upstream 36278 9868402 ~ 9870589 (+)
LOC118942868 mkrn1 coding upstream 42124 9824762 ~ 9864743 (+)
LOC118942867 NA coding upstream 136719 9769444 ~ 9771487 (+)
LOC118942866 LOC106576670 coding upstream 183881 9532104 ~ 9722986 (+)
LOC118936575 LOC106592244 coding upstream 493696 9402494 ~ 9413171 (+)
LOC118942870 NA coding downstream 73723 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 163404 10070476 ~ 10098024 (+)
LOC110510583 LOC106597972 coding downstream 414120 10321192 ~ 10323104 (+)
LOC110490805 LOC106591178 coding downstream 615874 10522946 ~ 10699071 (+)
LOC118942873 NA coding downstream 693916 10600988 ~ 10602420 (+)
G1706086 NA non-coding upstream 10263 9896348 ~ 9896604 (+)
G1706082 NA non-coding upstream 17995 9887852 ~ 9888872 (+)
G1706065 NA non-coding upstream 49225 9850537 ~ 9857642 (+)
G1706069 NA non-coding upstream 49844 9856620 ~ 9857023 (+)
G1706062 NA non-coding upstream 71072 9835259 ~ 9835795 (+)
G1706095 NA non-coding downstream 20274 9927346 ~ 9927550 (+)
G1706096 NA non-coding downstream 23752 9930824 ~ 9931079 (+)
G1706103 NA non-coding downstream 37915 9944987 ~ 9945244 (+)
G1706105 NA non-coding downstream 49543 9956615 ~ 9957061 (+)
G1706106 NA non-coding downstream 50037 9957109 ~ 9957879 (+)
G1706013 NA other upstream 153394 9748185 ~ 9753473 (+)
G1705920 NA other upstream 246727 9659331 ~ 9660140 (+)
G1705918 NA other upstream 251149 9655298 ~ 9655718 (+)
G1705279 NA other upstream 893704 9011926 ~ 9013163 (+)
G1705267 NA other upstream 930302 8975304 ~ 8976565 (+)
G1706090 NA other downstream 8641 9915713 ~ 9918019 (+)
G1706152 NA other downstream 227316 10134388 ~ 10135384 (+)
LOC110531908 LOC106594049 other downstream 1202356 11103180 ~ 11138813 (+)
G1706652 NA other downstream 1363657 11270729 ~ 11272473 (+)
G1706711 NA other downstream 1490968 11398040 ~ 11399288 (+)

Expression


Co-expression Network