G1706813


Basic Information

Item Value
gene id G1706813
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9912572 ~ 9914323 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954856
TTTTACCACAGAGATTCAACTCTCTGGCTCATGTCCATGTGACAATTATTCAGCACCTTTTTTTAAAAATTCAGAGCCAAGATCTATTGTCTGTATGACCTTCAGTTCTAGCTGGTAGTAATTCCAATACACCACTAACTCATCATTCTGCCCCCAAACCAATCCTCTAGTAAATATCTAGCTGCTATTGAATTCTCCTGTCACTATGATAATTCTATTGCTGTTGAGGCGTCTCATGTCGTCTCTCTATTATGGCTGAACTGATTGTTGGAATGTTTTCACTAGTGGTCTTCTAGGGATGAGGGAACATCTGTCTAATGGTCTTCTGGGTGATGAGGGAACATCTGTCTAATGGGGATGAGGTAACATCTGTCTAGTGGTCTTCTGTGGATGAGGGAACATCTGTCTAGTGGTCTTCTGTGGATGAGGGAACACCTGTCTAATGGGGATGAGGGAACATCTGTCTAATGGTCTTCTGGGGACGAGGGAACATCTGTCTAATGGGGATGAGGGAACATCTGTCTAATGGGGATGAGGGAACATCTGTCTAATGGAGATGAGGGTACATCTGTCTAAGGGGATGAGGGAACATCTGGCTAATGTGGATGAGGGAACATCTGTCTTATGGTCTTCTGGGGATGGGGGAACATCTGTCTAATGGGATGAGGGAACATCTGTCTAATGGTCTTCTGGGGATGAGGGAACATCTGTCTAATGGTCTAATGGGGATGAGGGAACATCTGTCTAATGGTCTTCTGGGGATGAGGGAACATCTGTCTAATGGTCTTCTGGGGATGAGGGAACATCTGTCTAATTGGGATGAGGGAACATCTCACTAATGGGGATGAGGGAACATCTCACTAATGGGATGAGGGAACATCTCTCTAATGGGATGAGGGAGCATCTGTCTAATGGGATGAGGGAACATCTGTCTAATGGGGATGAGGGAACATCTGTCTAATGGGGATGAGGGAACAACAGACCTACAGTTTAGCACTGACACATACAATGACGATACCCTCAACTCTCCATCGAGGTTTTAGTCTCGTAGGTTACATCTggaaagggcaccctattccctataaagagAGCAATACTTTGGACTGCTTCTTAACCTCATTTTGACATGCCTCTGGTAAGAAATAGTGTCATGTAAAATGGAAGAGGGTGTCATTTTCAGATGTCCCGTAGTCTTTAAACGTCACTACCGTTTACTCAACCTGTCCTCTTGGTTTGTCTTGTCTTACATCCAGGGACTCGTTATGTCCGTCCTCACTGTGTCtcatatatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954856 True 1291 lncRNA 0.45 2 9912572 9914323

Neighbor

gene id symbol gene type direction distance location
LOC110490693 il17r coding downstream 18743 9875675 ~ 9893829 (-)
LOC110510472 LOC108426397 coding downstream 121176 9742838 ~ 9791396 (-)
LOC110507938 LOC106591072 coding downstream 404112 9487581 ~ 9508460 (-)
LOC110515809 LOC106592244 coding downstream 432056 9464081 ~ 9480516 (-)
LOC118936574 LOC106592244 coding downstream 532697 9371753 ~ 9379875 (-)
LOC118942869 arhgef39 coding upstream 42582 9956905 ~ 10061152 (-)
LOC118942871 NA coding upstream 213747 10128070 ~ 10129253 (-)
LOC110513868 LOC105024897 coding upstream 219965 10134288 ~ 10402746 (-)
LOC118942997 NA coding upstream 471159 10385482 ~ 10387576 (-)
LOC118942872 LOC106609835 coding upstream 491855 10406178 ~ 10491072 (-)
LOC118936576 LOC106609822 non-coding downstream 78 9911082 ~ 9926166 (-)
G1706805 NA non-coding downstream 38601 9873301 ~ 9873971 (-)
G1706781 NA non-coding downstream 53478 9824591 ~ 9859094 (-)
G1706780 LOC106609808 non-coding downstream 62775 9849309 ~ 9849797 (-)
G1706784 NA non-coding downstream 90036 9821705 ~ 9822536 (-)
G1706814 NA non-coding upstream 4782 9919105 ~ 9919507 (-)
G1706815 NA non-coding upstream 10222 9924545 ~ 9925203 (-)
G1706816 NA non-coding upstream 12773 9927096 ~ 9927302 (-)
G1706825 NA non-coding upstream 28549 9942872 ~ 9943613 (-)
G1706832 NA non-coding upstream 40936 9955259 ~ 9955508 (-)
G1705975 NA other downstream 269631 9641950 ~ 9642941 (-)
LOC118942865 LOC106593190 other downstream 635498 9261999 ~ 9277148 (-)
LOC118942864 NA other downstream 809417 9100061 ~ 9104616 (-)
LOC118942856 crbl2 other downstream 1103648 8805889 ~ 8808961 (-)
G1706990 NA other upstream 446101 10360424 ~ 10360975 (-)
G1706993 NA other upstream 453561 10367884 ~ 10368439 (-)
G1707057 NA other upstream 616294 10530617 ~ 10531271 (-)
LOC110499727 LOC106609821 other upstream 906601 10796557 ~ 10897355 (-)
LOC110518048 LOC106576476 other upstream 1050512 10903853 ~ 11086469 (-)

Expression


Co-expression Network