G1706825


Basic Information

Item Value
gene id G1706825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9942872 ~ 9943613 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954871
ctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctctacaacccatctagtgtttccctctacaacccatctagtgtttccctctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctctACAACCCATCACTATTTCcctctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctctctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctctctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctctacaacccatctagtgtttccctttctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctggctacaacccatctagtttttccctctacaacccatctagtgtttccctgtctacaacccatctagtgtttccctctacaacccatctagtgtttccctctacaacccatctagtgtttccctggCTACAACCCATCGAGTTTTTCcctctacaacccatctagtgtttccctctctacaacccatctagtgtttccctctacaacccatctagtgtttccctctacaacccatctag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954871 True 742 lncRNA 0.46 1 9942872 9943613

Neighbor

gene id symbol gene type direction distance location
LOC118936576 LOC106609822 coding downstream 16706 9911082 ~ 9926166 (-)
LOC110490693 il17r coding downstream 49043 9875675 ~ 9893829 (-)
LOC110510472 LOC108426397 coding downstream 151476 9742838 ~ 9791396 (-)
LOC110507938 LOC106591072 coding downstream 434412 9487581 ~ 9508460 (-)
LOC110515809 LOC106592244 coding downstream 462356 9464081 ~ 9480516 (-)
LOC118942869 arhgef39 coding upstream 13292 9956905 ~ 10061152 (-)
LOC118942871 NA coding upstream 184457 10128070 ~ 10129253 (-)
LOC110513868 LOC105024897 coding upstream 190675 10134288 ~ 10402746 (-)
LOC118942997 NA coding upstream 441869 10385482 ~ 10387576 (-)
LOC118942872 LOC106609835 coding upstream 462565 10406178 ~ 10491072 (-)
G1706816 NA non-coding downstream 15570 9927096 ~ 9927302 (-)
G1706815 NA non-coding downstream 17669 9924545 ~ 9925203 (-)
G1706814 NA non-coding downstream 23365 9919105 ~ 9919507 (-)
G1706813 NA non-coding downstream 28549 9912572 ~ 9914323 (-)
G1706832 NA non-coding upstream 11646 9955259 ~ 9955508 (-)
G1706833 NA non-coding upstream 15967 9959580 ~ 9960000 (-)
G1706835 NA non-coding upstream 23551 9967164 ~ 9978503 (-)
G1706837 NA non-coding upstream 26030 9969643 ~ 9972053 (-)
G1706838 NA non-coding upstream 29066 9972679 ~ 9973222 (-)
G1705975 NA other downstream 299931 9641950 ~ 9642941 (-)
LOC118942865 LOC106593190 other downstream 665798 9261999 ~ 9277148 (-)
LOC118942864 NA other downstream 839717 9100061 ~ 9104616 (-)
LOC118942856 crbl2 other downstream 1133948 8805889 ~ 8808961 (-)
G1706990 NA other upstream 416811 10360424 ~ 10360975 (-)
G1706993 NA other upstream 424271 10367884 ~ 10368439 (-)
G1707057 NA other upstream 587004 10530617 ~ 10531271 (-)
LOC110499727 LOC106609821 other upstream 877311 10796557 ~ 10897355 (-)
LOC110518048 LOC106576476 other upstream 1021222 10903853 ~ 11086469 (-)

Expression


Co-expression Network