G1706105


Basic Information

Item Value
gene id G1706105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9956615 ~ 9957061 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953875
TAGAGACAAGCATGAAGtgttaataatattataatatactgtatattaccatagaGACAAGCATGTTACTAATATTATAATATACCGTATATTACCATAGAGACAAGCATGATATGTTACTAATATTTCAGCTCTTAAATGTAAATAGACAGTAAAAATCATGATTTAACAttcagatgacatggtgttgtgCTGCCAAAATATCCCAGGGGACAGTTTTGATTCCCAATCTAGTAATACAGTATTTTCCTGCTgagcttttgctctgacatataaATGACAACATTCTATTCAGGACAAAACATTCATTTATTTCAGAGTCAAATCTCACATTTTCCATCTGCTGGAGCTTCTATCGTGAAGGTGTTTCAAAGTGTCTTTGGCATCAGTGTTAAAATCTTCACATTTCATATCATCTAActacctcccatctctcctcataTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953875 True 447 lncRNA 0.33 1 9956615 9957061

Neighbor

gene id symbol gene type direction distance location
LOC110516560 LOC106576660 coding upstream 86026 9868402 ~ 9870589 (+)
LOC118942868 mkrn1 coding upstream 91872 9824762 ~ 9864743 (+)
LOC118942867 NA coding upstream 186467 9769444 ~ 9771487 (+)
LOC118942866 LOC106576670 coding upstream 233629 9532104 ~ 9722986 (+)
LOC118936575 LOC106592244 coding upstream 543444 9402494 ~ 9413171 (+)
LOC118942870 NA coding downstream 23734 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 113415 10070476 ~ 10098024 (+)
LOC110510583 LOC106597972 coding downstream 364131 10321192 ~ 10323104 (+)
LOC110490805 LOC106591178 coding downstream 565885 10522946 ~ 10699071 (+)
LOC118942873 NA coding downstream 643927 10600988 ~ 10602420 (+)
G1706103 NA non-coding upstream 11371 9944987 ~ 9945244 (+)
G1706096 NA non-coding upstream 25536 9930824 ~ 9931079 (+)
G1706095 NA non-coding upstream 29065 9927346 ~ 9927550 (+)
G1706087 NA non-coding upstream 49543 9906867 ~ 9907072 (+)
G1706086 NA non-coding upstream 60011 9896348 ~ 9896604 (+)
G1706106 NA non-coding downstream 48 9957109 ~ 9957879 (+)
G1706108 NA non-coding downstream 2513 9959574 ~ 9963195 (+)
G1706122 NA non-coding downstream 52029 10009090 ~ 10009474 (+)
G1706136 NA non-coding downstream 111069 10068130 ~ 10068706 (+)
G1706139 NA non-coding downstream 131249 10088310 ~ 10126777 (+)
G1706090 NA other upstream 38596 9915713 ~ 9918019 (+)
G1706013 NA other upstream 203142 9748185 ~ 9753473 (+)
G1705920 NA other upstream 296475 9659331 ~ 9660140 (+)
G1705918 NA other upstream 300897 9655298 ~ 9655718 (+)
G1705279 NA other upstream 943452 9011926 ~ 9013163 (+)
G1706152 NA other downstream 177327 10134388 ~ 10135384 (+)
LOC110531908 LOC106594049 other downstream 1152367 11103180 ~ 11138813 (+)
G1706652 NA other downstream 1313668 11270729 ~ 11272473 (+)
G1706711 NA other downstream 1440979 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 1611368 11568429 ~ 11568956 (+)

Expression


Co-expression Network