G1706108


Basic Information

Item Value
gene id G1706108
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 9959574 ~ 9963195 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953880
atatcagggtaattacactgtaataacatcaggatagagtggacagagggttctagttcctctgctctatatcagggtaattacactgtaataacatcaggatagagtggacagagggttctagttcctctgctctatatcagggtaattacactgtaataacaccaggatagagggttctagttcctctgctctatatcagggtaattacactgtaataacatcagGAGGGTTCTAGTTActctgctctatatcagggtaattacactgtaataacatcaGGATAGAGtgttctagttcctctgctctatatcagggtaattacactAATAACATCAGGACAGAGTGTTCTAGTTCctctgctctatatcagggtaattacactgtaataacatcaggatagagtggacagagggatctagttcctctgctctatatcagggtaattacactgtaataacatcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953880 True 466 lncRNA 0.39 4 9959574 9963195

Neighbor

gene id symbol gene type direction distance location
LOC110516560 LOC106576660 coding upstream 88985 9868402 ~ 9870589 (+)
LOC118942868 mkrn1 coding upstream 94831 9824762 ~ 9864743 (+)
LOC118942867 NA coding upstream 189426 9769444 ~ 9771487 (+)
LOC118942866 LOC106576670 coding upstream 236588 9532104 ~ 9722986 (+)
LOC118936575 LOC106592244 coding upstream 546403 9402494 ~ 9413171 (+)
LOC118942870 NA coding downstream 17600 9980795 ~ 9981137 (+)
LOC118942996 NA coding downstream 107281 10070476 ~ 10098024 (+)
LOC110510583 LOC106597972 coding downstream 357997 10321192 ~ 10323104 (+)
LOC110490805 LOC106591178 coding downstream 559751 10522946 ~ 10699071 (+)
LOC118942873 NA coding downstream 637793 10600988 ~ 10602420 (+)
G1706106 NA non-coding upstream 1695 9957109 ~ 9957879 (+)
G1706105 NA non-coding upstream 2513 9956615 ~ 9957061 (+)
G1706103 NA non-coding upstream 14330 9944987 ~ 9945244 (+)
G1706096 NA non-coding upstream 28495 9930824 ~ 9931079 (+)
G1706095 NA non-coding upstream 32024 9927346 ~ 9927550 (+)
G1706122 NA non-coding downstream 45895 10009090 ~ 10009474 (+)
G1706136 NA non-coding downstream 104935 10068130 ~ 10068706 (+)
G1706139 NA non-coding downstream 125115 10088310 ~ 10126777 (+)
G1706143 NA non-coding downstream 139006 10102201 ~ 10104396 (+)
G1706151 NA non-coding downstream 158055 10121250 ~ 10121559 (+)
G1706090 NA other upstream 41555 9915713 ~ 9918019 (+)
G1706013 NA other upstream 206101 9748185 ~ 9753473 (+)
G1705920 NA other upstream 299434 9659331 ~ 9660140 (+)
G1705918 NA other upstream 303856 9655298 ~ 9655718 (+)
G1705279 NA other upstream 946411 9011926 ~ 9013163 (+)
G1706152 NA other downstream 171193 10134388 ~ 10135384 (+)
LOC110531908 LOC106594049 other downstream 1146233 11103180 ~ 11138813 (+)
G1706652 NA other downstream 1307534 11270729 ~ 11272473 (+)
G1706711 NA other downstream 1434845 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 1605234 11568429 ~ 11568956 (+)

Expression


Co-expression Network