Gene
RNA
| Item | Value |
|---|---|
| gene id | G1706835 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 9967164 ~ 9978503 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1954883 | False | 317 | lncRNA | 0.50 | 4 | 9967164 | 9978503 |
| TU1954884 | True | 228 | lncRNA | 0.50 | 3 | 9967164 | 9978228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936576 | LOC106609822 | coding | downstream | 40998 | 9911082 ~ 9926166 (-) |
| LOC110490693 | il17r | coding | downstream | 73335 | 9875675 ~ 9893829 (-) |
| LOC110510472 | LOC108426397 | coding | downstream | 175768 | 9742838 ~ 9791396 (-) |
| LOC110507938 | LOC106591072 | coding | downstream | 458704 | 9487581 ~ 9508460 (-) |
| LOC110515809 | LOC106592244 | coding | downstream | 486648 | 9464081 ~ 9480516 (-) |
| LOC118942871 | NA | coding | upstream | 149567 | 10128070 ~ 10129253 (-) |
| LOC110513868 | LOC105024897 | coding | upstream | 155785 | 10134288 ~ 10402746 (-) |
| LOC118942997 | NA | coding | upstream | 406979 | 10385482 ~ 10387576 (-) |
| LOC118942872 | LOC106609835 | coding | upstream | 427675 | 10406178 ~ 10491072 (-) |
| LOC110499727 | LOC106609821 | coding | upstream | 818054 | 10796557 ~ 10897355 (-) |
| G1706833 | NA | non-coding | downstream | 7164 | 9959580 ~ 9960000 (-) |
| G1706832 | NA | non-coding | downstream | 11656 | 9955259 ~ 9955508 (-) |
| G1706825 | NA | non-coding | downstream | 23551 | 9942872 ~ 9943613 (-) |
| G1706816 | NA | non-coding | downstream | 39862 | 9927096 ~ 9927302 (-) |
| G1706815 | NA | non-coding | downstream | 41961 | 9924545 ~ 9925203 (-) |
| G1706861 | NA | non-coding | upstream | 56775 | 10035278 ~ 10035581 (-) |
| G1706877 | NA | non-coding | upstream | 117337 | 10095840 ~ 10142473 (-) |
| G1706894 | NA | non-coding | upstream | 146024 | 10124527 ~ 10125255 (-) |
| G1706895 | NA | non-coding | upstream | 147522 | 10126025 ~ 10126469 (-) |
| G1706896 | NA | non-coding | upstream | 148009 | 10126512 ~ 10126916 (-) |
| G1705975 | NA | other | downstream | 324223 | 9641950 ~ 9642941 (-) |
| LOC118942865 | LOC106593190 | other | downstream | 690090 | 9261999 ~ 9277148 (-) |
| LOC118942864 | NA | other | downstream | 864009 | 9100061 ~ 9104616 (-) |
| LOC118942856 | crbl2 | other | downstream | 1158240 | 8805889 ~ 8808961 (-) |
| G1706990 | NA | other | upstream | 381921 | 10360424 ~ 10360975 (-) |
| G1706993 | NA | other | upstream | 389381 | 10367884 ~ 10368439 (-) |
| G1707057 | NA | other | upstream | 552114 | 10530617 ~ 10531271 (-) |
| LOC110518048 | LOC106576476 | other | upstream | 986332 | 10903853 ~ 11086469 (-) |
