G1706139


Basic Information

Item Value
gene id G1706139
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10088310 ~ 10126777 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953922
gtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
>TU1953921
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtctctgtgtgtgtctgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953922 False 232 lncRNA 0.50 2 10088310 10126777
TU1953921 True 243 lncRNA 0.50 2 10126515 10126777

Neighbor

gene id symbol gene type direction distance location
LOC118942870 NA coding upstream 107173 9980795 ~ 9981137 (+)
LOC110516560 LOC106576660 coding upstream 217721 9868402 ~ 9870589 (+)
LOC118942868 mkrn1 coding upstream 223567 9824762 ~ 9864743 (+)
LOC118942867 NA coding upstream 318162 9769444 ~ 9771487 (+)
LOC118942866 LOC106576670 coding upstream 365324 9532104 ~ 9722986 (+)
LOC110510583 LOC106597972 coding downstream 194415 10321192 ~ 10323104 (+)
LOC110490805 LOC106591178 coding downstream 396169 10522946 ~ 10699071 (+)
LOC118942873 NA coding downstream 474211 10600988 ~ 10602420 (+)
LOC110514895 LOC106576365 coding downstream 603773 10730550 ~ 10791811 (+)
LOC110510616 NA coding downstream 667992 10794769 ~ 10796991 (+)
G1706136 NA non-coding upstream 19604 10068130 ~ 10068706 (+)
G1706122 NA non-coding upstream 78836 10009090 ~ 10009474 (+)
G1706108 NA non-coding upstream 125115 9959574 ~ 9963195 (+)
G1706106 NA non-coding upstream 130431 9957109 ~ 9957879 (+)
G1706105 NA non-coding upstream 131249 9956615 ~ 9957061 (+)
G1706198 NA non-coding downstream 104571 10231348 ~ 10232855 (+)
G1706224 NA non-coding downstream 164326 10291103 ~ 10292017 (+)
G1706252 NA non-coding downstream 260313 10387090 ~ 10387614 (+)
G1706261 NA non-coding downstream 279297 10406074 ~ 10407348 (+)
G1706277 NA non-coding downstream 320724 10447501 ~ 10450684 (+)
G1706090 NA other upstream 170291 9915713 ~ 9918019 (+)
G1706013 NA other upstream 334837 9748185 ~ 9753473 (+)
G1705920 NA other upstream 428170 9659331 ~ 9660140 (+)
G1705918 NA other upstream 432592 9655298 ~ 9655718 (+)
G1705279 NA other upstream 1075147 9011926 ~ 9013163 (+)
G1706152 NA other downstream 7611 10134388 ~ 10135384 (+)
LOC110531908 LOC106594049 other downstream 982651 11103180 ~ 11138813 (+)
G1706652 NA other downstream 1143952 11270729 ~ 11272473 (+)
G1706711 NA other downstream 1271263 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 1441652 11568429 ~ 11568956 (+)

Expression


Co-expression Network