G1706152


Basic Information

Item Value
gene id G1706152
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10134388 ~ 10135384 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1953937
TGTCTACCCTCAGCGTGATCAGGTGTATATATATTATCTCTCTTACTtcatctccagcacctcctcCAGGTGTTTCCTGCGTTCTGCCCTCAGTGTGGTCAGGTGGGCCTCCTTCTCAGCCAATGACTGCTGGGTAGAGGACAGCTTGGCCTGCATGGACTCCAGCTCCAGTTTCACCTTCCCCATGGCCGCAAGCAGCTCCTCCATCTGCCACAAAGatgatgatacacacacacacagacagggtggGATGgaaagaggggacagagagagggacagagagagggacagagagagggacagagagaggaacagagagggacagagagggacagagagagggacagagagggacaaagagggggacagagagggaaagagacggggacagagagggacagagagggggacagagagggacagagagagggaaagagagggggacagagagtgacagagtgagggacagagagggggatagatagggagacagagagggggataaATAGGGGgacaaagagggacagagagaaggatgagTGTGAAGAGAAAACACCGATACGAGGAAGAAAACAGAGGAAGAACATATGTAAAATAAGGAAAGAGGACAACAGGAagtgatgcagacagacagatggacagtgGACAAGATGGATGGAGAGCGAGAGGTGAGAGatgacaggcagagagaggacagtatCCCACGGCaacacggagagagagaaggagtgaagtGGTGAGAGGAGACAAAGAAGgtgagagagagatggagaaaggagggggagaggagggaaggagacaggacAGTGAATGTAGATAATGAGGTTGTGTAGGGGAGAGTTgaagacacacagggagagagagaaaccaggaatCAGAGGAGACCACTGATAGTAGTCTCAGTATTAACAGATATTGACCTACAGTGtcccactctgtgtgtgtgtaaac

Function

NR:

description
PREDICTED: ELKS/Rab6-interacting/CAST family member 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1953937 True 951 TUCP 0.52 2 10134388 10135384

Neighbor

gene id symbol gene type direction distance location
LOC118942996 NA coding upstream 36364 10070476 ~ 10098024 (+)
LOC118942870 NA coding upstream 153251 9980795 ~ 9981137 (+)
LOC110516560 LOC106576660 coding upstream 263799 9868402 ~ 9870589 (+)
LOC118942868 mkrn1 coding upstream 269645 9824762 ~ 9864743 (+)
LOC118942867 NA coding upstream 364240 9769444 ~ 9771487 (+)
LOC110510583 LOC106597972 coding downstream 185808 10321192 ~ 10323104 (+)
LOC110490805 LOC106591178 coding downstream 387562 10522946 ~ 10699071 (+)
LOC118942873 NA coding downstream 465604 10600988 ~ 10602420 (+)
LOC110514895 LOC106576365 coding downstream 595166 10730550 ~ 10791811 (+)
LOC110510616 NA coding downstream 659385 10794769 ~ 10796991 (+)
G1706139 NA non-coding upstream 7611 10088310 ~ 10126777 (+)
G1706151 NA non-coding upstream 12829 10121250 ~ 10121559 (+)
G1706143 NA non-coding upstream 29992 10102201 ~ 10104396 (+)
G1706136 NA non-coding upstream 65682 10068130 ~ 10068706 (+)
G1706122 NA non-coding upstream 124914 10009090 ~ 10009474 (+)
G1706198 NA non-coding downstream 95964 10231348 ~ 10232855 (+)
G1706224 NA non-coding downstream 155719 10291103 ~ 10292017 (+)
G1706252 NA non-coding downstream 251706 10387090 ~ 10387614 (+)
G1706261 NA non-coding downstream 270690 10406074 ~ 10407348 (+)
G1706277 NA non-coding downstream 312117 10447501 ~ 10450684 (+)
G1706090 NA other upstream 216369 9915713 ~ 9918019 (+)
G1706013 NA other upstream 380915 9748185 ~ 9753473 (+)
G1705920 NA other upstream 474248 9659331 ~ 9660140 (+)
G1705918 NA other upstream 478670 9655298 ~ 9655718 (+)
G1705279 NA other upstream 1121225 9011926 ~ 9013163 (+)
LOC110531908 LOC106594049 other downstream 974044 11103180 ~ 11138813 (+)
G1706652 NA other downstream 1135345 11270729 ~ 11272473 (+)
G1706711 NA other downstream 1262656 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 1433045 11568429 ~ 11568956 (+)
G1707462 NA other downstream 1518517 11653901 ~ 11654623 (+)

Expression


Co-expression Network