G1706985


Basic Information

Item Value
gene id G1706985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10349660 ~ 10350788 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1955076
GCCGTGTGCTTAAGCCTGTACATGCCCACATACGTGTGTGTCTATATAGATGGGGGTTTGTTCAGAGCACAGGCCATCTGGTGATAGACTAGAACATCCCTCATGGCTTCAGGCCTTCCTCTGAGACCTActgtcaatagactgagatagacctactgtcaatagactgagatacacctactgagacctactgtcaatagactgagatagacctactgagacctactgtcaatagactgagatacacctactgagacctactgtcaatagactgagataggtctgctgagacctactgtcaatagactgagatacacctactgagacctactgtcaatagactgagatagacttactgagacctactgtcaatagactgagatagacctactgagacctactgtcaatagactgagatagctctgctgagacctactgtcaatagactgagatacacctactgagacctactgtcaatagactgagatagctctgctgagacctactgtcaatAGATTTGAGATAGAcctactgagacctactgtcaatagactgagatacaCCTACTGACACCTActgtcaatagactgagatagctctgctgagacctactgtcaatagactgagatagacctactgtcaatagactgagatagacctactgtcaatagactgagatagacctactgtcaatagactgagatagatctactgtcaatagactgagatatacctactgtcaatagactgagatagatctgctgagacctactgtcaatagactgagatagacctactgagacctactgtcaatagactgagatagacctactgagacctactgtcaatagactgagatagctctgctgagacctactgtcaatagactgagatagacctactgtcaatagactgagat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1955076 True 919 lncRNA 0.43 2 10349660 10350788

Neighbor

gene id symbol gene type direction distance location
LOC118942871 NA coding downstream 220407 10128070 ~ 10129253 (-)
LOC118942869 arhgef39 coding downstream 288508 9956905 ~ 10061152 (-)
LOC118936576 LOC106609822 coding downstream 423494 9911082 ~ 9926166 (-)
LOC110490693 il17r coding downstream 455831 9875675 ~ 9893829 (-)
LOC110510472 LOC108426397 coding downstream 558264 9742838 ~ 9791396 (-)
LOC118942997 NA coding upstream 34694 10385482 ~ 10387576 (-)
LOC118942872 LOC106609835 coding upstream 55390 10406178 ~ 10491072 (-)
LOC110499727 LOC106609821 coding upstream 445769 10796557 ~ 10897355 (-)
LOC110518048 LOC106576476 coding upstream 553065 10903853 ~ 11086469 (-)
LOC110531911 LOC106577472 coding upstream 789382 11139647 ~ 11207072 (-)
G1706981 NA non-coding downstream 8528 10340702 ~ 10341132 (-)
G1706980 NA non-coding downstream 10708 10338466 ~ 10338952 (-)
G1706975 NA non-coding downstream 14503 10334796 ~ 10335157 (-)
G1706971 NA non-coding downstream 32501 10316682 ~ 10317159 (-)
G1706968 NA non-coding downstream 48795 10299158 ~ 10300865 (-)
G1706994 NA non-coding upstream 18379 10369167 ~ 10370182 (-)
G1706999 NA non-coding upstream 33953 10384741 ~ 10385158 (-)
G1707009 NA non-coding upstream 57280 10408068 ~ 10408488 (-)
G1707010 NA non-coding upstream 57704 10408492 ~ 10409335 (-)
G1705975 NA other downstream 706719 9641950 ~ 9642941 (-)
LOC110515809 LOC106592244 other downstream 875306 9464081 ~ 9480516 (-)
LOC118942865 LOC106593190 other downstream 1072586 9261999 ~ 9277148 (-)
LOC118942864 NA other downstream 1246505 9100061 ~ 9104616 (-)
LOC118942856 crbl2 other downstream 1540736 8805889 ~ 8808961 (-)
G1706990 NA other upstream 9636 10360424 ~ 10360975 (-)
G1706993 NA other upstream 17096 10367884 ~ 10368439 (-)
G1707057 NA other upstream 179829 10530617 ~ 10531271 (-)

Expression


Co-expression Network