G1706302


Basic Information

Item Value
gene id G1706302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10515881 ~ 10517090 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954177
aataataatcacactggttgtcgagggtgcaacaggtcagcacctcaggagtaaatgtcagttgaattttcatagccgatcattcagagtatctctaccgctcctgctgtctcaagagagttgaaaacagcaggtctgggacaggtagcacgtccagtgaacaggtcaggattccatagccgcaggcagaacagttgaaactggagcagcagcacggccaggtggactggggacagcaaggagtcatcaggccaggtagtcctgaggcatggtcctagggctcaggtcctccgagagagagaaagagagaattagagagagcatacttaaattcacacaagacactggataagacaggagaaatactccagatataacagactgaccctagcccccctgacacataaactactgcagcataaatactggaggctgagacaggaggggtcgggagacactgtggccccatccgacgatacccctggacagggccaaacaggcagggtATAACTCCACCCAACTTgctaaagcacagcccccacaccagtagaaggatatcttcaaccaccaacttaccatcctgagacaaggctgagtatagcccatgaagatctccgccacggcacaacacaAGGGGGGTGCcgaacccagacaggaagatcacgtcagtgactcaacccattcaagtgacgcacccctcctagggacggcattaACCCCTCACTACACTAACCCTACACTACCCCCACACTACAttaacaccacactacactaactCCACACTACActaactctacactacactaactctacactacactaacctTACACTTCACTAACTACACCATACActaacaccacactacactaaccctacactacactaatcTCACACTACACTAAACCCACACTACACaaaccctacactacactaaccctaaccccacactACACAAACCCTACACTAACCCCACACTACAAtaaccctacactacactaactccacactacactaaccctacactaaccccacactacactaaccctacGCTAAACCCACAGTACGCTAACCCTACACTTGAAAAAATGATCAAAAGATAGTCACAAATATTGCTGAAGTTTAGATTGTATTAAAACTGCagtccaaaatatattttacctgtTAAAATCCACAGTCAAAAATATTGCGTAACTTTATTGGAATTTACAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954177 True 1210 lncRNA 0.47 1 10515881 10517090

Neighbor

gene id symbol gene type direction distance location
LOC110510583 LOC106597972 coding upstream 192777 10321192 ~ 10323104 (+)
LOC118942996 NA coding upstream 417857 10070476 ~ 10098024 (+)
LOC118942870 NA coding upstream 534744 9980795 ~ 9981137 (+)
LOC110516560 LOC106576660 coding upstream 645292 9868402 ~ 9870589 (+)
LOC118942868 mkrn1 coding upstream 651138 9824762 ~ 9864743 (+)
LOC110490805 LOC106591178 coding downstream 5856 10522946 ~ 10699071 (+)
LOC118942873 NA coding downstream 83898 10600988 ~ 10602420 (+)
LOC110514895 LOC106576365 coding downstream 213460 10730550 ~ 10791811 (+)
LOC110510616 NA coding downstream 277679 10794769 ~ 10796991 (+)
LOC118942874 LOC106609820 coding downstream 383759 10900849 ~ 10902569 (+)
G1706278 NA non-coding upstream 57319 10450860 ~ 10458562 (+)
G1706277 NA non-coding upstream 65197 10447501 ~ 10450684 (+)
G1706261 NA non-coding upstream 108533 10406074 ~ 10407348 (+)
G1706252 NA non-coding upstream 128267 10387090 ~ 10387614 (+)
G1706224 NA non-coding upstream 223864 10291103 ~ 10292017 (+)
G1706346 NA non-coding downstream 68559 10585649 ~ 10587832 (+)
G1706349 NA non-coding downstream 72015 10589105 ~ 10589692 (+)
G1706391 NA non-coding downstream 161783 10678873 ~ 10679284 (+)
G1706392 NA non-coding downstream 162986 10680076 ~ 10680817 (+)
G1706152 NA other upstream 380497 10134388 ~ 10135384 (+)
G1706090 NA other upstream 597862 9915713 ~ 9918019 (+)
G1706013 NA other upstream 762408 9748185 ~ 9753473 (+)
G1705920 NA other upstream 855741 9659331 ~ 9660140 (+)
G1705918 NA other upstream 860163 9655298 ~ 9655718 (+)
LOC110531908 LOC106594049 other downstream 592338 11103180 ~ 11138813 (+)
G1706652 NA other downstream 753639 11270729 ~ 11272473 (+)
G1706711 NA other downstream 880950 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 1051339 11568429 ~ 11568956 (+)
G1707462 NA other downstream 1136811 11653901 ~ 11654623 (+)

Expression


Co-expression Network