G1706392


Basic Information

Item Value
gene id G1706392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10680076 ~ 10680817 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954294
ctctcttctgctttagtaggtttaccctgtttctctctcctctcttctgctttagtgggtttaccctgtttctctctcctctcttctgctttagtgggtttaccctgtttctctctcttctcttctgctcGACTGACATGTTTCTGTTTGCTGTTATATATCCCTTAAATATCCCTTCTTGAATTGTCACATTTAAGTGCTTATGTTTCCATTCCTAAAACCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954294 True 225 lncRNA 0.41 2 10680076 10680817

Neighbor

gene id symbol gene type direction distance location
LOC118942873 NA coding upstream 77656 10600988 ~ 10602420 (+)
LOC110510583 LOC106597972 coding upstream 356972 10321192 ~ 10323104 (+)
LOC118942996 NA coding upstream 582052 10070476 ~ 10098024 (+)
LOC118942870 NA coding upstream 698939 9980795 ~ 9981137 (+)
LOC110516560 LOC106576660 coding upstream 809487 9868402 ~ 9870589 (+)
LOC110514895 LOC106576365 coding downstream 49733 10730550 ~ 10791811 (+)
LOC110510616 NA coding downstream 113952 10794769 ~ 10796991 (+)
LOC118942874 LOC106609820 coding downstream 220032 10900849 ~ 10902569 (+)
LOC110531908 LOC106594049 coding downstream 422363 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 431395 11112212 ~ 11112675 (+)
G1706391 NA non-coding upstream 792 10678873 ~ 10679284 (+)
G1706349 NA non-coding upstream 90384 10589105 ~ 10589692 (+)
G1706346 NA non-coding upstream 92244 10585649 ~ 10587832 (+)
G1706302 NA non-coding upstream 162986 10515881 ~ 10517090 (+)
G1706278 NA non-coding upstream 221514 10450860 ~ 10458562 (+)
LOC110490805 LOC106591178 non-coding downstream 14816 10522946 ~ 10699071 (+)
G1706307 NA non-coding downstream 18974 10699791 ~ 10701318 (+)
G1706426 NA non-coding downstream 79749 10760566 ~ 10760967 (+)
G1706428 NA non-coding downstream 82007 10762824 ~ 10763875 (+)
G1706429 NA non-coding downstream 85595 10766412 ~ 10766700 (+)
G1706152 NA other upstream 544692 10134388 ~ 10135384 (+)
G1706090 NA other upstream 762057 9915713 ~ 9918019 (+)
G1706013 NA other upstream 926603 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1019936 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1024358 9655298 ~ 9655718 (+)
G1706652 NA other downstream 589912 11270729 ~ 11272473 (+)
G1706711 NA other downstream 717223 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 887612 11568429 ~ 11568956 (+)
G1707462 NA other downstream 973084 11653901 ~ 11654623 (+)

Expression


Co-expression Network