G1706428


Basic Information

Item Value
gene id G1706428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10762824 ~ 10763875 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954345
cactaggctaccctaccgccccactaggctaccctgccgccccactaggctaccctgccgccccactaggctaccctgccgccccactaggctaccctgccgccccactaggctaccctgccgccccactaggctaccctgccgcaccactaggctaccctgccgccccactaggctaccctgccgccccactaggctaccctgccgccccactaggctaccctgccgccccactaggctaccctgccgccctactaggctaccctaccgccccactaggctaccctgccgccccactaggctaccctgccgccccactaggctaccctgccgcccctgggTGAATTTAACTTTTCCTTGAGTCATTttccattaaggtatctttaccttTACTCCAGGATGATaattaggtactttttccaccactgccagaGGACCTGTTTAGGaatctacactgagtatacaaaacattaagaacacttccCTAATATTACATTGCACCCctgtttgccctcagaacagcattCAATTCATTGTGGCGTGGACTCGAAtaggtgtggaaagcgttccacagggaggctggcccatgttgactccaatgcttcccacagctgtgtcacTAGAAACTGAAGGAGTGTGACAGAAACCGGTGCTCCTGTcacctactaacataccccgttcaaaggcacttcaaccttttgtcttgcccattcaccctctgaataacacacacaatccatgtctcaaggcttaaaaatcctcctttaacccgtctcctcccctccatctacacggattgaagtggatttaacaagtgacgtcaataagggatcatatctttcacctggattcacctggtcagtctgtgtcatgcaaagagcagatgttcttaatgttttgtaaactcagtgtatagATATGCCTTGGCTTTGACCAATACCTCCTCCATTTCCCTAACTTTTAATAAGTCGGGTACCACACAGTGTTCATAGAGCAAGTAAGGTGTTGGTGTTGTCACTGGGCTGAGCGAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954345 True 1031 lncRNA 0.53 2 10762824 10763875

Neighbor

gene id symbol gene type direction distance location
LOC110490805 LOC106591178 coding upstream 64210 10522946 ~ 10699071 (+)
LOC118942873 NA coding upstream 160404 10600988 ~ 10602420 (+)
LOC110510583 LOC106597972 coding upstream 439720 10321192 ~ 10323104 (+)
LOC118942996 NA coding upstream 664800 10070476 ~ 10098024 (+)
LOC118942870 NA coding upstream 781687 9980795 ~ 9981137 (+)
LOC110510616 NA coding downstream 30894 10794769 ~ 10796991 (+)
LOC118942874 LOC106609820 coding downstream 136974 10900849 ~ 10902569 (+)
LOC110531908 LOC106594049 coding downstream 339305 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 348337 11112212 ~ 11112675 (+)
LOC118942876 fgl2 coding downstream 430670 11194545 ~ 11200949 (+)
G1706426 NA non-coding upstream 1857 10760566 ~ 10760967 (+)
G1706307 NA non-coding upstream 61506 10699791 ~ 10701318 (+)
G1706392 NA non-coding upstream 82007 10680076 ~ 10680817 (+)
G1706391 NA non-coding upstream 83540 10678873 ~ 10679284 (+)
G1706429 NA non-coding downstream 2537 10766412 ~ 10766700 (+)
G1706436 NA non-coding downstream 19185 10783060 ~ 10785280 (+)
G1706437 NA non-coding downstream 23767 10787642 ~ 10788399 (+)
G1706404 NA non-coding downstream 28231 10792106 ~ 10793113 (+)
G1706443 NA non-coding downstream 48894 10812769 ~ 10813262 (+)
G1706152 NA other upstream 627440 10134388 ~ 10135384 (+)
G1706090 NA other upstream 844805 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1009351 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1102684 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1107106 9655298 ~ 9655718 (+)
G1706652 NA other downstream 506854 11270729 ~ 11272473 (+)
G1706711 NA other downstream 634165 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 804554 11568429 ~ 11568956 (+)
G1707462 NA other downstream 890026 11653901 ~ 11654623 (+)

Expression


Co-expression Network