Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707180 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 10768745 ~ 10769306 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1955322 | True | 423 | lncRNA | 0.34 | 3 | 10768745 | 10769306 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942872 | LOC106609835 | coding | downstream | 277673 | 10406178 ~ 10491072 (-) |
| LOC110513868 | LOC105024897 | coding | downstream | 365999 | 10134288 ~ 10402746 (-) |
| LOC118942997 | NA | coding | downstream | 381169 | 10385482 ~ 10387576 (-) |
| LOC118942871 | NA | coding | downstream | 639492 | 10128070 ~ 10129253 (-) |
| LOC118942869 | arhgef39 | coding | downstream | 707593 | 9956905 ~ 10061152 (-) |
| LOC110499727 | LOC106609821 | coding | upstream | 27251 | 10796557 ~ 10897355 (-) |
| LOC110518048 | LOC106576476 | coding | upstream | 134547 | 10903853 ~ 11086469 (-) |
| LOC110531911 | LOC106577472 | coding | upstream | 370864 | 11139647 ~ 11207072 (-) |
| LOC110531893 | LOC105024883 | coding | upstream | 444898 | 11214204 ~ 11235532 (-) |
| LOC118942877 | NA | coding | upstream | 498077 | 11267383 ~ 11269567 (-) |
| G1707120 | NA | non-coding | downstream | 13143 | 10648018 ~ 10755602 (-) |
| G1707132 | NA | non-coding | downstream | 104150 | 10664117 ~ 10664595 (-) |
| G1707051 | NA | non-coding | downstream | 246067 | 10522316 ~ 10522678 (-) |
| G1707045 | NA | non-coding | downstream | 252832 | 10515689 ~ 10515913 (-) |
| G1707041 | NA | non-coding | downstream | 258794 | 10509748 ~ 10509951 (-) |
| G1707188 | NA | non-coding | upstream | 17892 | 10787198 ~ 10788254 (-) |
| G1707203 | NA | non-coding | upstream | 72267 | 10841573 ~ 10842637 (-) |
| G1707210 | NA | non-coding | upstream | 77753 | 10847059 ~ 10847992 (-) |
| G1707267 | NA | non-coding | upstream | 213295 | 10982601 ~ 10983012 (-) |
| G1707057 | NA | other | downstream | 237474 | 10530617 ~ 10531271 (-) |
| G1706993 | NA | other | downstream | 400306 | 10367884 ~ 10368439 (-) |
| G1706990 | NA | other | downstream | 407770 | 10360424 ~ 10360975 (-) |
| G1705975 | NA | other | downstream | 1125804 | 9641950 ~ 9642941 (-) |
| LOC110515809 | LOC106592244 | other | downstream | 1294391 | 9464081 ~ 9480516 (-) |
| G1707276 | NA | other | upstream | 249720 | 11019026 ~ 11021038 (-) |
| G1707317 | NA | other | upstream | 360909 | 11130215 ~ 11133790 (-) |
