G1706404


Basic Information

Item Value
gene id G1706404
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10792106 ~ 10793113 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954313
AGGTATCGTGTAGGCCTGGGTGATATTTCTGCCTCAGTGATCTGTGGCTGGGCCTTTGTTTCTGCTTCAACATCGCCCCCATGTGGACGGGATGTGCAAGTGCCTGCTGCGCCAGAGTCAAATCTTAATGTCAAATACACAAAGAGATGTGTTTTGGAATGTGAAGGGATCTGGTGACTCAGTGGTAAGGATCTCACCCCATACGCATGGGGTCGTAGGTATGTTTCCTGACAAAACCTGGAGGACTGTGACAACTGCTGGGGGTTTCCCCTCCTGTGAACAGCAGCAGTTATGGGGGAAAACCTCTGGGAAAAGTAGACCTGTAGGTTTTTAAAAAAGATCCATTTGAAAATTAAGGGTCTACTTTCTCAGAGGTTTATGACCACAACACATCCTGATCCAGAGCTGTGACTTGAACCTACAACCCTGAACATATGGGGTGAGATCTTTACACCAGAGCCCCAGACTCCTTCACACCTCTTAACTGTTTTCTTTGTCATTTTCACGTTGAGAATTGCTGACATTACCAATAACTCAAACCCAAGATTTGAACCCATAACCTCTATGGTTGAAGGTAGGAAGTGAACCTCAAAGCCACAGACTCTCACACGTCTAGCTCATCTTACGACGATCTAAATAGTTAAACACCATGCCTTCTCTCAACTAATGATCTAGTAAGATCGTTTGTTTTCTAAACGACCTTGTGTGACACAGCCATGTACAATTTATGGAGTTGGTTTTATGATTTTCTAAAGACAATGACACGCTCAAATGTATTGCCGTTAATTATTGTAGCATTTGATGGACAAGTCATTCTGATTTGATCTCATGATTATGTCAAACGGAACCTCAACTCAAACTTGACATTTTAATGCAGACTTTTTGTTGGTCTGTTCAAGATTCTGGGCTTGATTCAATCCGTAGTGCTGAAGATCTGCTGTACAGCGTGATTCAAATTGTCACCTGaccctttggaaagtattcagaccccttgactttttccagatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954313 True 1008 lncRNA 0.43 1 10792106 10793113

Neighbor

gene id symbol gene type direction distance location
LOC110514895 LOC106576365 coding upstream 295 10730550 ~ 10791811 (+)
LOC110490805 LOC106591178 coding upstream 93492 10522946 ~ 10699071 (+)
LOC118942873 NA coding upstream 189686 10600988 ~ 10602420 (+)
LOC110510583 LOC106597972 coding upstream 469002 10321192 ~ 10323104 (+)
LOC118942996 NA coding upstream 694082 10070476 ~ 10098024 (+)
LOC110510616 NA coding downstream 1656 10794769 ~ 10796991 (+)
LOC118942874 LOC106609820 coding downstream 107736 10900849 ~ 10902569 (+)
LOC110531908 LOC106594049 coding downstream 310067 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 319099 11112212 ~ 11112675 (+)
LOC118942876 fgl2 coding downstream 401432 11194545 ~ 11200949 (+)
G1706437 NA non-coding upstream 3707 10787642 ~ 10788399 (+)
G1706436 NA non-coding upstream 6826 10783060 ~ 10785280 (+)
G1706429 NA non-coding upstream 25406 10766412 ~ 10766700 (+)
G1706428 NA non-coding upstream 28231 10762824 ~ 10763875 (+)
G1706426 NA non-coding upstream 31139 10760566 ~ 10760967 (+)
G1706443 NA non-coding downstream 19656 10812769 ~ 10813262 (+)
G1706447 NA non-coding downstream 23170 10816283 ~ 10817733 (+)
G1706491 NA non-coding downstream 104905 10898018 ~ 10899271 (+)
G1706454 NA non-coding downstream 110742 10903855 ~ 10905995 (+)
G1706496 NA non-coding downstream 118900 10912013 ~ 10926463 (+)
G1706152 NA other upstream 656722 10134388 ~ 10135384 (+)
G1706090 NA other upstream 874087 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1038633 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1131966 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1136388 9655298 ~ 9655718 (+)
G1706652 NA other downstream 477616 11270729 ~ 11272473 (+)
G1706711 NA other downstream 604927 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 775316 11568429 ~ 11568956 (+)
G1707462 NA other downstream 860788 11653901 ~ 11654623 (+)

Expression


Co-expression Network