G1706447


Basic Information

Item Value
gene id G1706447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10816283 ~ 10817733 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954376
gtagtgtacaggACTCCGTTCTCTCATACAATAGAAAGGGATATTTATTATTGATCAGAATCAGAATCCGGGTGGAATCCAAGGGATGTTGCAGctataccagagagagagagagagggttcttTAGTAACCTCACGGGAGGGAAAAATACACACCGCGCTTTACAGATATCATGCCAGAAATCTCGGAAGAGAGCGATGCACAGGCTGTAAGGTGAGCCGGTGGCGGCACCGTGGCAGTGTGGGCCGCCCTCCCGGGTGTTATCAGTGGTGCTAGAGCCATCTCCTTCCCTATGTACATCCAAGTGAGCTGCCTTCCTTAGACGCCTTTGGTCCAGATCAATAAGAAAGAggacttagagagagagagaggtccagacaCAAATCACTGTTGTTGTGATTGAAGAAAATAAATCATTAAAATAATACCcttttccatttatttatttttaaaatcacAAGAAGGAAGATAGAAAATGAATGAAAACGGTTGGTTCACTGACAGCGGTGTCTACTACATCAGGTATGGTTGGTTCACTGACAGAGGTGTCTACTACATCAGGTATGGTTGGTTCACTGACAGAGGTGTCTACTACATCAGGTATGGTTGGTTCACTGGCAGCGGTGTCTACTACATCAGGTATGGTTGGTTCACTGGCAGAGGTGTCTACTACATCAGGTATGGTCAGGAATGATCGAAGCAAAAACATTGACTAATATCCAGCTGCCAGAGAGACTAAT

Function

NR:

description
putative homeodomain transcription factor 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954376 True 740 lncRNA 0.45 2 10816283 10817733

Neighbor

gene id symbol gene type direction distance location
LOC110510616 NA coding upstream 19292 10794769 ~ 10796991 (+)
LOC110514895 LOC106576365 coding upstream 24472 10730550 ~ 10791811 (+)
LOC110490805 LOC106591178 coding upstream 117669 10522946 ~ 10699071 (+)
LOC118942873 NA coding upstream 213863 10600988 ~ 10602420 (+)
LOC110510583 LOC106597972 coding upstream 493179 10321192 ~ 10323104 (+)
LOC118942874 LOC106609820 coding downstream 83116 10900849 ~ 10902569 (+)
LOC110531908 LOC106594049 coding downstream 285447 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 294479 11112212 ~ 11112675 (+)
LOC118942876 fgl2 coding downstream 376812 11194545 ~ 11200949 (+)
LOC110499797 LOC106596128 coding downstream 493457 11311190 ~ 11316722 (+)
G1706443 NA non-coding upstream 3021 10812769 ~ 10813262 (+)
G1706404 NA non-coding upstream 23170 10792106 ~ 10793113 (+)
G1706437 NA non-coding upstream 27884 10787642 ~ 10788399 (+)
G1706436 NA non-coding upstream 31003 10783060 ~ 10785280 (+)
G1706429 NA non-coding upstream 49583 10766412 ~ 10766700 (+)
G1706491 NA non-coding downstream 80285 10898018 ~ 10899271 (+)
G1706454 NA non-coding downstream 86122 10903855 ~ 10905995 (+)
G1706496 NA non-coding downstream 94280 10912013 ~ 10926463 (+)
G1706503 NA non-coding downstream 115010 10932743 ~ 10933825 (+)
G1706521 NA non-coding downstream 162267 10980000 ~ 10980452 (+)
G1706152 NA other upstream 680899 10134388 ~ 10135384 (+)
G1706090 NA other upstream 898264 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1062810 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1156143 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1160565 9655298 ~ 9655718 (+)
G1706652 NA other downstream 452996 11270729 ~ 11272473 (+)
G1706711 NA other downstream 580307 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 750696 11568429 ~ 11568956 (+)
G1707462 NA other downstream 836168 11653901 ~ 11654623 (+)

Expression


Co-expression Network