G1706503


Basic Information

Item Value
gene id G1706503
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10932743 ~ 10933825 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954448
TCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACACACTACTGTACCCCTCTCCCCCTGTGAGGCCCCCAGTCATCTAAACACACTACTGTACCCCTCTCCCCCTGTGAGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGCCCCCAGTCATCTAAACACACTACTGTACCCCTCTCCCCCTGTGAGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACACACtactttacctctctccccctgtgaGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACACACTACTGTACCTCTCTACCCCTGTGAGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACACACTACTGTACCTCTCTACCCCTGTGAGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACACACTACTGTACCCCTCTCCCCATGTGAGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGTCATCTAAACACACTACTGTACCCCTCTCCCCCTGTGAGGCCCCCAGTCATCTAAACAcactactgtacctctctccccctgtgaGGCCCCCAGGCAGTCAGTCATCTAAACAcactactgtacctctctccccaTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954448 True 981 lncRNA 0.55 2 10932743 10933825

Neighbor

gene id symbol gene type direction distance location
LOC118942874 LOC106609820 coding upstream 30174 10900849 ~ 10902569 (+)
LOC110510616 NA coding upstream 135752 10794769 ~ 10796991 (+)
LOC110514895 LOC106576365 coding upstream 140932 10730550 ~ 10791811 (+)
LOC110490805 LOC106591178 coding upstream 234129 10522946 ~ 10699071 (+)
LOC110531908 LOC106594049 coding downstream 169355 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 178387 11112212 ~ 11112675 (+)
LOC118942876 fgl2 coding downstream 260720 11194545 ~ 11200949 (+)
LOC110499797 LOC106596128 coding downstream 377365 11311190 ~ 11316722 (+)
LOC110499792 LOC106595912 coding downstream 407811 11341636 ~ 11354995 (+)
G1706496 NA non-coding upstream 6280 10912013 ~ 10926463 (+)
G1706454 NA non-coding upstream 26748 10903855 ~ 10905995 (+)
G1706491 NA non-coding upstream 33472 10898018 ~ 10899271 (+)
G1706447 NA non-coding upstream 115010 10816283 ~ 10817733 (+)
G1706443 NA non-coding upstream 119481 10812769 ~ 10813262 (+)
G1706521 NA non-coding downstream 46175 10980000 ~ 10980452 (+)
G1706534 NA non-coding downstream 87373 11021198 ~ 11021877 (+)
G1706541 NA non-coding downstream 93973 11027798 ~ 11028422 (+)
G1706544 NA non-coding downstream 102428 11036253 ~ 11038813 (+)
G1706543 NA non-coding downstream 102596 11036421 ~ 11037362 (+)
G1706152 NA other upstream 797359 10134388 ~ 10135384 (+)
G1706090 NA other upstream 1014724 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1179270 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1272603 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1277025 9655298 ~ 9655718 (+)
G1706652 NA other downstream 336904 11270729 ~ 11272473 (+)
G1706711 NA other downstream 464215 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 634604 11568429 ~ 11568956 (+)
G1707462 NA other downstream 720076 11653901 ~ 11654623 (+)

Expression


Co-expression Network