G1706521


Basic Information

Item Value
gene id G1706521
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 10980000 ~ 10980452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954466
tgtgtgtgtgtgtgtgtgtgtgtgtacacaaggGGCAAAAGAGGGAAATCTGAGTCTGTGTTGCCTTGCTGGATAGTCAAGCTCCTCACTGTTAGTCCTCAGCTGGGGTGTAGAGCCATGACCTTTACAGCAGACTGGAGTTGTGCTGAGAGGCTCTGCCCGacacacagtcagtgtaGTGGTCATATTGATAGAGGGGGCTGGGGTACAGCATTAAgagcagtcagacacacacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954466 True 240 lncRNA 0.51 2 10980000 10980452

Neighbor

gene id symbol gene type direction distance location
LOC118942874 LOC106609820 coding upstream 77431 10900849 ~ 10902569 (+)
LOC110510616 NA coding upstream 183009 10794769 ~ 10796991 (+)
LOC110514895 LOC106576365 coding upstream 188189 10730550 ~ 10791811 (+)
LOC110490805 LOC106591178 coding upstream 281386 10522946 ~ 10699071 (+)
LOC110531908 LOC106594049 coding downstream 122728 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 131760 11112212 ~ 11112675 (+)
LOC118942876 fgl2 coding downstream 214093 11194545 ~ 11200949 (+)
LOC110499797 LOC106596128 coding downstream 330738 11311190 ~ 11316722 (+)
LOC110499792 LOC106595912 coding downstream 361184 11341636 ~ 11354995 (+)
G1706503 NA non-coding upstream 46175 10932743 ~ 10933825 (+)
G1706496 NA non-coding upstream 53537 10912013 ~ 10926463 (+)
G1706454 NA non-coding upstream 74005 10903855 ~ 10905995 (+)
G1706491 NA non-coding upstream 80729 10898018 ~ 10899271 (+)
G1706447 NA non-coding upstream 162267 10816283 ~ 10817733 (+)
G1706534 NA non-coding downstream 40746 11021198 ~ 11021877 (+)
G1706541 NA non-coding downstream 47346 11027798 ~ 11028422 (+)
G1706544 NA non-coding downstream 55801 11036253 ~ 11038813 (+)
G1706543 NA non-coding downstream 55969 11036421 ~ 11037362 (+)
G1706152 NA other upstream 844616 10134388 ~ 10135384 (+)
G1706090 NA other upstream 1061981 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1226527 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1319860 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1324282 9655298 ~ 9655718 (+)
G1706652 NA other downstream 290277 11270729 ~ 11272473 (+)
G1706711 NA other downstream 417588 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 587977 11568429 ~ 11568956 (+)
G1707462 NA other downstream 673449 11653901 ~ 11654623 (+)

Expression


Co-expression Network