G1706541


Basic Information

Item Value
gene id G1706541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11027798 ~ 11028422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954494
ggtctgtgtttcgttcaggtttaaaccacctctgttcatgtcttccatagagaatgtcttgatctacttcaggtttaaaccacctctgttcatgtcttccatagagaatgtcttgatctacttcagataaggtctgtgtttcgttcaggcttaaaccgcctctgttcatgtcttccatagagaatgtcttgatctacttccaataaggtctgtgtttcgttcaggcttaaaccgcctctgttcatgtcttccatagagaatgtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954494 True 264 lncRNA 0.42 3 11027798 11028422

Neighbor

gene id symbol gene type direction distance location
LOC118942874 LOC106609820 coding upstream 125229 10900849 ~ 10902569 (+)
LOC110510616 NA coding upstream 230807 10794769 ~ 10796991 (+)
LOC110514895 LOC106576365 coding upstream 235987 10730550 ~ 10791811 (+)
LOC110490805 LOC106591178 coding upstream 329184 10522946 ~ 10699071 (+)
LOC110531908 LOC106594049 coding downstream 74758 11103180 ~ 11138813 (+)
LOC118942875 NA coding downstream 83790 11112212 ~ 11112675 (+)
LOC118942876 fgl2 coding downstream 166123 11194545 ~ 11200949 (+)
LOC110499797 LOC106596128 coding downstream 282768 11311190 ~ 11316722 (+)
LOC110499792 LOC106595912 coding downstream 313214 11341636 ~ 11354995 (+)
G1706534 NA non-coding upstream 5921 11021198 ~ 11021877 (+)
G1706521 NA non-coding upstream 47346 10980000 ~ 10980452 (+)
G1706503 NA non-coding upstream 93973 10932743 ~ 10933825 (+)
G1706496 NA non-coding upstream 101335 10912013 ~ 10926463 (+)
G1706454 NA non-coding upstream 121803 10903855 ~ 10905995 (+)
G1706544 NA non-coding downstream 7831 11036253 ~ 11038813 (+)
G1706543 NA non-coding downstream 7999 11036421 ~ 11037362 (+)
G1706588 NA non-coding downstream 82399 11110821 ~ 11113348 (+)
G1706589 NA non-coding downstream 85252 11113674 ~ 11114465 (+)
G1706152 NA other upstream 892414 10134388 ~ 10135384 (+)
G1706090 NA other upstream 1109779 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1274325 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1367658 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1372080 9655298 ~ 9655718 (+)
G1706652 NA other downstream 242307 11270729 ~ 11272473 (+)
G1706711 NA other downstream 369618 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 540007 11568429 ~ 11568956 (+)
G1707462 NA other downstream 625479 11653901 ~ 11654623 (+)

Expression


Co-expression Network