G1706589


Basic Information

Item Value
gene id G1706589
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11113674 ~ 11114465 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954549
TGATGGCCCCAGtgtaactgtgttgatgatggccccagtgtaactgtgttgatgatggccccagtgtaactgtgttgatgatggccccagtgtaactgtgttacaggtgttgatgatgaccccagtgtaactgtgttgatgatggccccagtgtaactgtgttacaggtgttgatggccccagtgtaactgtgttacaggtgttgatgatgaccccagtgtaactgtgttgatgatggccccagtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954549 True 247 lncRNA 0.49 2 11113674 11114465

Neighbor

gene id symbol gene type direction distance location
LOC118942875 NA coding upstream 999 11112212 ~ 11112675 (+)
LOC118942874 LOC106609820 coding upstream 211105 10900849 ~ 10902569 (+)
LOC110510616 NA coding upstream 316683 10794769 ~ 10796991 (+)
LOC110514895 LOC106576365 coding upstream 321863 10730550 ~ 10791811 (+)
LOC110490805 LOC106591178 coding upstream 415060 10522946 ~ 10699071 (+)
LOC118942876 fgl2 coding downstream 80080 11194545 ~ 11200949 (+)
LOC110499797 LOC106596128 coding downstream 196725 11311190 ~ 11316722 (+)
LOC110499792 LOC106595912 coding downstream 227171 11341636 ~ 11354995 (+)
LOC110518478 lsm8 coding downstream 241533 11355998 ~ 11359023 (+)
LOC110490628 LOC106609728 coding downstream 295986 11410451 ~ 11414640 (+)
G1706588 NA non-coding upstream 326 11110821 ~ 11113348 (+)
G1706544 NA non-coding upstream 74861 11036253 ~ 11038813 (+)
G1706543 NA non-coding upstream 76312 11036421 ~ 11037362 (+)
G1706541 NA non-coding upstream 85252 11027798 ~ 11028422 (+)
G1706534 NA non-coding upstream 91797 11021198 ~ 11021877 (+)
G1706590 NA non-coding downstream 3474 11117939 ~ 11118387 (+)
G1706605 NA non-coding downstream 55278 11169743 ~ 11170016 (+)
G1706615 NA non-coding downstream 70814 11185279 ~ 11186324 (+)
G1706624 NA non-coding downstream 102543 11217008 ~ 11217387 (+)
G1706649 NA non-coding downstream 146592 11261057 ~ 11261272 (+)
G1706152 NA other upstream 978290 10134388 ~ 10135384 (+)
G1706090 NA other upstream 1195655 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1360201 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1453534 9659331 ~ 9660140 (+)
G1705918 NA other upstream 1457956 9655298 ~ 9655718 (+)
G1706652 NA other downstream 156264 11270729 ~ 11272473 (+)
G1706711 NA other downstream 283575 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 453964 11568429 ~ 11568956 (+)
G1707462 NA other downstream 539436 11653901 ~ 11654623 (+)
G1707772 LOC106576513 other downstream 749197 11863662 ~ 11864573 (+)

Expression


Co-expression Network