G1706590


Basic Information

Item Value
gene id G1706590
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11117939 ~ 11118387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954550
taccatggtctctctctctgatcccaaGCTTTACACTGCAGACTGCAGTAGGACAGTAtggaaccatggtctctctctctgatcccaaGCTTTACACTGCAGCTAGCAGTAGGACAGTATGgtaccatggtctctctctctgatcccaaGCTTTACACTGCAGCTAGCAGTAGGACAGTATGAAAACATTCATCATTTCCAATTCCTGACATATTCTCTTATAGAACCACTTCAACAGGTAGCCTAGAGTttaagagcgttgggtcagtaaccgaaaggtcgctggctCGAATCCCTGAGACGAATCTGTtaatgttcccttgagcaaggcaatgaaccctaattgctcttgtatgtgctaaatgactaacatggaCATGTAAAATGTAGTACAG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954550 True 395 lncRNA 0.45 2 11117939 11118387

Neighbor

gene id symbol gene type direction distance location
LOC118942875 NA coding upstream 5264 11112212 ~ 11112675 (+)
LOC118942874 LOC106609820 coding upstream 215370 10900849 ~ 10902569 (+)
LOC110510616 NA coding upstream 320948 10794769 ~ 10796991 (+)
LOC110514895 LOC106576365 coding upstream 326128 10730550 ~ 10791811 (+)
LOC118942873 NA coding upstream 515519 10600988 ~ 10602420 (+)
LOC118942876 fgl2 coding downstream 76158 11194545 ~ 11200949 (+)
LOC110499797 LOC106596128 coding downstream 192803 11311190 ~ 11316722 (+)
LOC110499792 LOC106595912 coding downstream 223249 11341636 ~ 11354995 (+)
LOC110518478 lsm8 coding downstream 237611 11355998 ~ 11359023 (+)
LOC110490628 LOC106609728 coding downstream 292064 11410451 ~ 11414640 (+)
G1706589 NA non-coding upstream 3474 11113674 ~ 11114465 (+)
G1706588 NA non-coding upstream 4591 11110821 ~ 11113348 (+)
G1706544 NA non-coding upstream 79126 11036253 ~ 11038813 (+)
G1706543 NA non-coding upstream 80577 11036421 ~ 11037362 (+)
G1706541 NA non-coding upstream 89517 11027798 ~ 11028422 (+)
G1706605 NA non-coding downstream 51356 11169743 ~ 11170016 (+)
G1706615 NA non-coding downstream 66892 11185279 ~ 11186324 (+)
G1706624 NA non-coding downstream 98621 11217008 ~ 11217387 (+)
G1706649 NA non-coding downstream 142670 11261057 ~ 11261272 (+)
G1706653 LOC106592662 non-coding downstream 156559 11274946 ~ 11275779 (+)
LOC110531908 LOC106594049 other upstream 1514 11103180 ~ 11138813 (+)
G1706152 NA other upstream 982555 10134388 ~ 10135384 (+)
G1706090 NA other upstream 1199920 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1364466 9748185 ~ 9753473 (+)
G1705920 NA other upstream 1457799 9659331 ~ 9660140 (+)
G1706652 NA other downstream 152342 11270729 ~ 11272473 (+)
G1706711 NA other downstream 279653 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 450042 11568429 ~ 11568956 (+)
G1707462 NA other downstream 535514 11653901 ~ 11654623 (+)
G1707772 LOC106576513 other downstream 745275 11863662 ~ 11864573 (+)

Expression


Co-expression Network