G1707317


Basic Information

Item Value
gene id G1707317
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11130215 ~ 11133790 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1955511
TGATTGTTACCAGGTACAAAAAGAGTCCGTGTggtaacaggaacactaacatCCCACTGTTTGGGTATTGTAACATCTTAACACAAGACTGTATTGTAATGGGATATCTTAAAAGATTGAGATGTCAATGCAAgtattgagaaacctgtccaagcATGAAAGGGTATCGAGGGCTGTATGCATTGCACCATTCTTCCTACTAggtactgactgtctgtctgggagggtttGTACGAGTTGACCTTTGTATTACAAGAGTGTAAGTCAAGACATTTAGATTCTCTCAAgcaaactgtttgggtatagcAATAACACTTCAATGTCTTTGTAAAGAAACAACTACAGATATGAAGATATGAATGCAATTATTGTTGCAATTCAAACTGGATGAGGGATGAGGGCATGTTTAGTCTGAGCTTGTATCTAACAGGGATAAAACCCTGCAGGACTGTGGGTGGGAGTGGTACTGGCACGTGGGCTTCTAGCTCTTACATTCCATGATCATTGTCTTGGCAAACACTACACTGTGCAACATCTACACAACACAGTCCCTCTCTCCAGTCCTTCAATCCAGTCCCTCactccagtccctctctccagTCCCTCGCTCCAGTCCCTCGCTCCAGTCCCTCAATCCCTCgctccagtccctctctccctctctccagtccctCGCTCCAGTCCCTCGCTCCAGTCCTTCAATCCAGTCCCTCGCTCCAGTCCCTCGCTCCAGTCCCTCgctccagtccctctctccagTCCCTCAATCCCTCGCTCTAGTCCCTCTCTCCAGTCCCTCGCTCCAGTCCCTCAATCCCTCGCTCCAGTCCCTCGCTCCAGTCCCTCGCTCCAGTCCCTCACTCCAGTCCCTCACTCcagtccctcactccctccctcgctctagTCCCTCTCTCCAGTCCCTCGTTCCAGTCCCTCACTCTAGTCCCTCACTCCAACTACAGtaccagccaatcagttgtgttgtgacaaggtagaggtggtatacagaagatagccctatttggtaaaagtacAAATCCATAGTAtgtcaagaacagttcaaataagcaaagagaaacgagagtccatcattactttaagacatgaaggtcagtcaatccgggagATTTAATGAACTtttaatgtttcttcaagtgcagtcgcaaaaactattaagcactatgatgaaacaaCAGTGTCTAAAACGAGAGAGCACATGTTCTATGCCAGGCTAAATCATGCCTCATTAGCTCCTTATGACTGCCTCATCAACCCTGCCAGGAAATGTATAAACTTggtctccactataaaaagcatctaaacattatctcccatttcttATAGAgtcatttggttttcaacagcagaCATTTGTATAAAACTTGCTGTCAGTCTCTCCTTCGTTTTCTTAATTATCTTTTCTCTACCTTCTTATATAAAGTGAATGGTTCCGAACTAGACAGACAACAAATTGAGCTGGTTGTCATAGCAACATACACAACTTTTTTTCCCAGTTGACTAGCTAAATCGACACTTTGTTGCCAAAACTAAAATGGATGAGTGGAAGGAACATTTAGCTGTTTTGATCTTTTCAGATTTGGGCGACACTGCATTGAATGACCCAGAGAAAAGCCGAGTTAAGAATACAACCTGCGATGTGCGTTGTTGCTTCGAGGGCTGACTAGCAGAGAGGGCTGACTAGCAGAGAGGGCTGACTAGcagagaaggaaaaaaaagttGTTGACTTCATCAAAACTGTCACTAAGGAAGAGTTTAGCATCCTTCCATttcaacgtcatagatttagccggtggtcaTTTGTGACagagacaccggctggaatgcggttttaaccaatcagcattcaggactagacccacctgttgtataaaCTTTGATGAACATGTACTtcatagtatgtgtgtgtgtgtactgtatcttTATAACTTTGTAATGTCACCTTCACACTGAACTCCCAAGACCTATAACTCAAAGGTGTTTTGACAGTTACAGTGACCATGATAAATCAATGAACAGAGTGGAGTTATATTTTGTGACTGAGCTATTGCTGTTAGTGTCCTCTGTTAGATTAGATTGACCTCTAGGTGTATGTCCCAAATGCCacactattccttatatagtgcactacttttgaccagaacccactTTCGACACAGTTACAGTATTAATCTGtattgaagcatggaggaggcagACACGGTTACAGTATTAATCTGtattgaagcatggaggaggcagACACGGTTACAGCATTAATCTGtattgaagcatggaggaggcagACACGGTTACAGTATTAATCTGtattgaagcatggaggaggcagACACGGTTACTCTGTAAGTAAGACAATAATGAATCTAAGAGGTTCCAGCTTACTGTGGAAAAGTACAGACCTGTATTGCCAGCTCTCTGACTCAGTGTTCATGAGGACACACCTTCCTGTAGTAATTACTGAGAAATGACATTATGGCACAATAGCTGAATCATGCCATCtgataaattgtgtgtgtgtgtgtatatacaaggTATATGCACGTATTGTGTGTCTATagccctgcgtgtgtgtgtgtgcgtacgtgcgtgcgtgtaaTGCAGCGTGAACCTGTCATGAGTCGTGAGACGAAGGGCTCGGTGAGCTGCAGCACACCATGGTCAACGTACTGCAGGAAGGTGTGTCTGGGGAGACAGCGAACGCCCAACACGGACAGTAGAGTGTGATACCCTGCAGACACACAGCAACACCACGTCAGATGCCATTTGCTTGAATATGTATTTAATATTGTAGAAGCAGGCTCTCTATAAGAGAGAAGCAGGCTCTCTATAAGAGAGAAGCAGGCTCTCTATAAGAGAGAAGCAGGCTCTCTATAAGAGAGAAGCAGGCTCTCTATAAGAGAGAAGCAGGCTCTCTATAAGAGAGAAGCAGGCTCTCTATAAGCTCTGTTGAAGTGCTTTGTTATTTTGAGACACTGGACAGGGAGGTTCAAATAAGTTTAACGCCTTGGTTATTTGGAGAAGTTTGAACAAGGTAAAATACATGAATAAACAGTGTTATTTTGAGAAGATTAAACGGGGTTCTTCTTaccaggagggagggggagacacagagtcTTTGTAGCCTCCAGTATCCGACACATCACGTGAAACACGGCCCACTCTGCTGAACTCCCCCGTTGCTTTCTACAGCAGAGAGGATAGTAAACATCAATGGGACAGGACTTGCatacacactgtagacacacacacacacacacacacacaaacacacactaacacaaactaaacacactaaca

Function

NR:

description
gamma-secretase-activating protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1955511 True 3315 TUCP 0.44 3 11130215 11133790

Neighbor

gene id symbol gene type direction distance location
LOC110518048 LOC106576476 coding downstream 43746 10903853 ~ 11086469 (-)
LOC110499727 LOC106609821 coding downstream 232860 10796557 ~ 10897355 (-)
LOC118942872 LOC106609835 coding downstream 639143 10406178 ~ 10491072 (-)
LOC110513868 LOC105024897 coding downstream 727469 10134288 ~ 10402746 (-)
LOC118942997 NA coding downstream 742639 10385482 ~ 10387576 (-)
LOC110531911 LOC106577472 coding upstream 6380 11139647 ~ 11207072 (-)
LOC110531893 LOC105024883 coding upstream 80414 11214204 ~ 11235532 (-)
LOC118942877 NA coding upstream 133593 11267383 ~ 11269567 (-)
LOC110515612 LOC106592662 coding upstream 139627 11273417 ~ 11284152 (-)
LOC110515610 tsn8 coding upstream 154454 11288244 ~ 11304066 (-)
G1707326 NA non-coding downstream 8391 11120567 ~ 11121824 (-)
G1707324 NA non-coding downstream 12682 11117130 ~ 11117533 (-)
G1707319 NA non-coding downstream 19581 11109911 ~ 11110634 (-)
G1707297 NA non-coding downstream 58208 11071651 ~ 11072007 (-)
G1707341 NA non-coding upstream 43877 11177667 ~ 11179821 (-)
G1707359 NA non-coding upstream 94807 11228597 ~ 11230330 (-)
G1707374 NA non-coding upstream 125289 11259079 ~ 11259812 (-)
G1707384 NA non-coding upstream 143875 11277665 ~ 11277884 (-)
G1707276 NA other downstream 109177 11019026 ~ 11021038 (-)
G1707057 NA other downstream 598944 10530617 ~ 10531271 (-)
G1706993 NA other downstream 761776 10367884 ~ 10368439 (-)
G1707366 NA other upstream 247872 11363157 ~ 11397594 (-)
LOC118942880 LOC105024872 other upstream 481520 11615310 ~ 11628453 (-)
prickle1b LOC106576510 other upstream 807339 11933307 ~ 11954482 (-)

Expression


Co-expression Network