G1707341


Basic Information

Item Value
gene id G1707341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11177667 ~ 11179821 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1955538
caggaaacacagggataaataccctggcacagagagacaggaaacacagggataaataccctggcacagagagacaggaaacacagggataaatacactggcacagagagacagggaacacagggataaatacactggcacagagagacaggaaacacagggataaatacactggcacagagagacaggaaacacagggataaatacactggctcagagagacaggaaactcagggataaatacactggcacagagagacaggaaactcagggataaatacactggcacagagagacaggaaacacagggataaatacactggcacagagagacaggaaacacagggatatatacactggcacagagagacaggaaacacagggataaatacactggtacagagagacaggaaacacagggataaatacactggcacagagagacaggaaacacagggataaatacactggggaaaataagcgacacctgga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1955538 True 492 lncRNA 0.46 3 11177667 11179821

Neighbor

gene id symbol gene type direction distance location
LOC110518048 LOC106576476 coding downstream 91198 10903853 ~ 11086469 (-)
LOC110499727 LOC106609821 coding downstream 280312 10796557 ~ 10897355 (-)
LOC118942872 LOC106609835 coding downstream 686595 10406178 ~ 10491072 (-)
LOC110513868 LOC105024897 coding downstream 774921 10134288 ~ 10402746 (-)
LOC110531893 LOC105024883 coding upstream 34383 11214204 ~ 11235532 (-)
LOC118942877 NA coding upstream 87562 11267383 ~ 11269567 (-)
LOC110515612 LOC106592662 coding upstream 93596 11273417 ~ 11284152 (-)
LOC110515610 tsn8 coding upstream 108423 11288244 ~ 11304066 (-)
LOC110499803 LOC106609751 coding upstream 147452 11327273 ~ 11335783 (-)
LOC110531911 LOC106577472 non-coding downstream 37032 11139647 ~ 11207072 (-)
G1707326 NA non-coding downstream 55843 11120567 ~ 11121824 (-)
G1707324 NA non-coding downstream 60134 11117130 ~ 11117533 (-)
G1707319 NA non-coding downstream 67033 11109911 ~ 11110634 (-)
G1707297 NA non-coding downstream 105660 11071651 ~ 11072007 (-)
G1707359 NA non-coding upstream 48776 11228597 ~ 11230330 (-)
G1707374 NA non-coding upstream 79258 11259079 ~ 11259812 (-)
G1707384 NA non-coding upstream 97844 11277665 ~ 11277884 (-)
G1707387 NA non-coding upstream 105020 11284841 ~ 11285045 (-)
G1707391 NA non-coding upstream 117576 11297397 ~ 11297769 (-)
G1707317 NA other downstream 43877 11130215 ~ 11133790 (-)
G1707276 NA other downstream 156629 11019026 ~ 11021038 (-)
G1707366 NA other upstream 201841 11363157 ~ 11397594 (-)
LOC118942880 LOC105024872 other upstream 435489 11615310 ~ 11628453 (-)
prickle1b LOC106576510 other upstream 761308 11933307 ~ 11954482 (-)
LOC110499744 LOC106609792 other upstream 940955 12119840 ~ 12125727 (-)

Expression


Co-expression Network