Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707359 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 11228597 ~ 11230330 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1955563 | True | 259 | lncRNA | 0.52 | 2 | 11228597 | 11230330 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110531911 | LOC106577472 | coding | downstream | 21525 | 11139647 ~ 11207072 (-) |
| LOC110518048 | LOC106576476 | coding | downstream | 142128 | 10903853 ~ 11086469 (-) |
| LOC110499727 | LOC106609821 | coding | downstream | 331242 | 10796557 ~ 10897355 (-) |
| LOC118942872 | LOC106609835 | coding | downstream | 737525 | 10406178 ~ 10491072 (-) |
| LOC110513868 | LOC105024897 | coding | downstream | 825851 | 10134288 ~ 10402746 (-) |
| LOC118942877 | NA | coding | upstream | 37053 | 11267383 ~ 11269567 (-) |
| LOC110515612 | LOC106592662 | coding | upstream | 43087 | 11273417 ~ 11284152 (-) |
| LOC110515610 | tsn8 | coding | upstream | 57914 | 11288244 ~ 11304066 (-) |
| LOC110499803 | LOC106609751 | coding | upstream | 96943 | 11327273 ~ 11335783 (-) |
| tymp | typh | coding | upstream | 136385 | 11366715 ~ 11370357 (-) |
| G1707341 | NA | non-coding | downstream | 48776 | 11177667 ~ 11179821 (-) |
| G1707326 | NA | non-coding | downstream | 106773 | 11120567 ~ 11121824 (-) |
| G1707324 | NA | non-coding | downstream | 111064 | 11117130 ~ 11117533 (-) |
| G1707319 | NA | non-coding | downstream | 117963 | 11109911 ~ 11110634 (-) |
| G1707374 | NA | non-coding | upstream | 28749 | 11259079 ~ 11259812 (-) |
| G1707384 | NA | non-coding | upstream | 47335 | 11277665 ~ 11277884 (-) |
| G1707387 | NA | non-coding | upstream | 54511 | 11284841 ~ 11285045 (-) |
| G1707391 | NA | non-coding | upstream | 67067 | 11297397 ~ 11297769 (-) |
| G1707395 | LOC106596128 | non-coding | upstream | 80945 | 11311275 ~ 11313725 (-) |
| G1707317 | NA | other | downstream | 94807 | 11130215 ~ 11133790 (-) |
| G1707276 | NA | other | downstream | 207559 | 11019026 ~ 11021038 (-) |
| G1707366 | NA | other | upstream | 151332 | 11363157 ~ 11397594 (-) |
| LOC118942880 | LOC105024872 | other | upstream | 384980 | 11615310 ~ 11628453 (-) |
| prickle1b | LOC106576510 | other | upstream | 710799 | 11933307 ~ 11954482 (-) |
| LOC110499744 | LOC106609792 | other | upstream | 890446 | 12119840 ~ 12125727 (-) |
