G1706653 (LOC106592662)


Basic Information

Item Value
gene id G1706653
gene name LOC106592662
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11274946 ~ 11275779 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954622
agggggtTGAGAAACTGCGCTACACCACTACATAGGTCAATAGTACctaaagtcacacacacaaaaggaGTGTGTGTTCTGCCTGTAACAGTCTCAGCTTCCCCTATTCCAGGGTTTCCCAGGTGGCGGCCCGCGGGTGggttttatttattatatatatatatttctttgtgGAATTGTTATTGTTGGACATTAAAGATTGTtgaaacaccaggaaatcagctccaagtgattttaattgaagaaatctgttcccaagtattcccaggCATAATGGAGAGAAGTGTGAACGTATACAAATGTgaacaaggtttgaaatgattatgtttcgTCAAACTATATCTGTTTGGGCATCTTGCGGTCAATTTGTGGTTTACAAATGAATTGTAATTGTGTTCCGGCCCCTCAACCATCCGTTCCAGAAAAGATcgtcccgcggctgaatctagttgatgatccctgccttATTCTGTCCTCTTCCAGGTAACACAGTGGCACACGCAGGTATCCATTCTTACACTCGCTCTGTtgtccttcctcctctctatGTCAGCAACACGTCTTCCTGTCTGTGATCACCGCTGGCCCGTTGATTGGTCGTGAGTTGGCTCGGAGCAGGACGCGGGGCGAGTCATTGTTGCTAGGGGCCTGTTGCCGGACGGCAGTGCCGTTGCGCGCCAGCAGCTCGCGGGCCATCATCATGAAGGCATCGTCCACATTCTGGGCCTCCTTAGCTGAGGTCTCTAACGCTGCCAGGATGCCTCTCTCCTCAGCCATACAGCATGCCTCCTGGAACAACACCTGACGCTCAGACTCCAGGTCAGACTTGTTACC

Function

NR:

description
ras-related protein Rab-19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954622 True 834 lncRNA 0.49 1 11274946 11275779

Neighbor

gene id symbol gene type direction distance location
LOC118942876 fgl2 coding upstream 73997 11194545 ~ 11200949 (+)
LOC110531908 LOC106594049 coding upstream 136133 11103180 ~ 11138813 (+)
LOC118942875 NA coding upstream 162271 11112212 ~ 11112675 (+)
LOC118942874 LOC106609820 coding upstream 372377 10900849 ~ 10902569 (+)
LOC110510616 NA coding upstream 477955 10794769 ~ 10796991 (+)
LOC110499797 LOC106596128 coding downstream 35411 11311190 ~ 11316722 (+)
LOC110499792 LOC106595912 coding downstream 65857 11341636 ~ 11354995 (+)
LOC110518478 lsm8 coding downstream 80219 11355998 ~ 11359023 (+)
LOC110490628 LOC106609728 coding downstream 134672 11410451 ~ 11414640 (+)
LOC110503752 LOC106576575 coding downstream 156505 11432284 ~ 11468646 (+)
G1706649 NA non-coding upstream 13674 11261057 ~ 11261272 (+)
G1706624 NA non-coding upstream 57559 11217008 ~ 11217387 (+)
G1706615 NA non-coding upstream 88622 11185279 ~ 11186324 (+)
G1706605 NA non-coding upstream 104930 11169743 ~ 11170016 (+)
G1706590 NA non-coding upstream 156559 11117939 ~ 11118387 (+)
G1706654 NA non-coding downstream 271 11276050 ~ 11276592 (+)
G1706655 NA non-coding downstream 921 11276700 ~ 11277472 (+)
G1706657 NA non-coding downstream 7417 11283196 ~ 11284120 (+)
G1706678 NA non-coding downstream 23085 11298864 ~ 11335045 (+)
G1706684 NA non-coding downstream 41344 11317123 ~ 11317792 (+)
G1706652 NA other upstream 2473 11270729 ~ 11272473 (+)
G1706152 NA other upstream 1139562 10134388 ~ 10135384 (+)
G1706090 NA other upstream 1356927 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1521473 9748185 ~ 9753473 (+)
G1706711 NA other downstream 122261 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 292650 11568429 ~ 11568956 (+)
G1707462 NA other downstream 378122 11653901 ~ 11654623 (+)
G1707772 LOC106576513 other downstream 587883 11863662 ~ 11864573 (+)
G1708014 NA other downstream 972249 12248028 ~ 12250124 (+)

Expression


Co-expression Network