Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707384 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 11277665 ~ 11277884 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1955633 | True | 220 | lncRNA | 0.40 | 1 | 11277665 | 11277884 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942877 | NA | coding | downstream | 8098 | 11267383 ~ 11269567 (-) |
| LOC110531893 | LOC105024883 | coding | downstream | 42133 | 11214204 ~ 11235532 (-) |
| LOC110531911 | LOC106577472 | coding | downstream | 70593 | 11139647 ~ 11207072 (-) |
| LOC110518048 | LOC106576476 | coding | downstream | 191196 | 10903853 ~ 11086469 (-) |
| LOC110499727 | LOC106609821 | coding | downstream | 380310 | 10796557 ~ 10897355 (-) |
| LOC110515610 | tsn8 | coding | upstream | 10360 | 11288244 ~ 11304066 (-) |
| LOC110499803 | LOC106609751 | coding | upstream | 49389 | 11327273 ~ 11335783 (-) |
| tymp | typh | coding | upstream | 88831 | 11366715 ~ 11370357 (-) |
| LOC118942879 | typh | coding | upstream | 101715 | 11379599 ~ 11383369 (-) |
| LOC110490863 | NA | coding | upstream | 107156 | 11361637 ~ 11405329 (-) |
| G1707374 | NA | non-coding | downstream | 17853 | 11259079 ~ 11259812 (-) |
| G1707359 | NA | non-coding | downstream | 47335 | 11228597 ~ 11230330 (-) |
| G1707341 | NA | non-coding | downstream | 97844 | 11177667 ~ 11179821 (-) |
| G1707326 | NA | non-coding | downstream | 155841 | 11120567 ~ 11121824 (-) |
| G1707387 | NA | non-coding | upstream | 6957 | 11284841 ~ 11285045 (-) |
| G1707391 | NA | non-coding | upstream | 19513 | 11297397 ~ 11297769 (-) |
| G1707395 | LOC106596128 | non-coding | upstream | 33391 | 11311275 ~ 11313725 (-) |
| G1707396 | LOC106596128 | non-coding | upstream | 35869 | 11313753 ~ 11315006 (-) |
| G1707397 | NA | non-coding | upstream | 39094 | 11316978 ~ 11317841 (-) |
| G1707317 | NA | other | downstream | 143875 | 11130215 ~ 11133790 (-) |
| G1707276 | NA | other | downstream | 256627 | 11019026 ~ 11021038 (-) |
| G1707366 | NA | other | upstream | 103778 | 11363157 ~ 11397594 (-) |
| LOC118942880 | LOC105024872 | other | upstream | 337426 | 11615310 ~ 11628453 (-) |
| prickle1b | LOC106576510 | other | upstream | 663245 | 11933307 ~ 11954482 (-) |
| LOC110499744 | LOC106609792 | other | upstream | 842892 | 12119840 ~ 12125727 (-) |
| LOC110512965 | LOC106609709 | other | upstream | 1187343 | 12464677 ~ 12465880 (-) |
