G1706657


Basic Information

Item Value
gene id G1706657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11283196 ~ 11284120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954626
GCACCATTTCTCCTAAAGGTTTGAGGCTGACTTCCTTACCTTAATTTTCTTGCCCTCGATGTCCACTGTCCGCACGGTGAAGTCCACTCCTATGGTGTTCTGTTGCCTCTCTGAGAACTGTCCTGACTTGAAGCTCTGGACCACGCAGGTCTTGCCCACGTTAGAATCTCCAATCAGGATGATCTTGAACAGGAAATCAAAGGATTCGTCCTGCTGCTCCACTCCTCCAGTTGGCTGTTGCATCGTGAAGAGGAGTGGGCTGTCTGGGCCTGGGAGCCACACCAAGACACTGACTTAGTGTCACGTCACAATGCTATGACTATGTTATAACTGTGTTATAAGCAAGTGAGTGATGTCTGCCTTACAATGCTATCCCGTGATGGTTGTTGCTAGGTTATAATCCCAGATGACCTAGGGTCTCTTGTTGACTTGTACCTGTCGCTTCGTGACTCCTAAATCCTCCCTGGCCAGAGAAGGCTCTTCCATATACAGTAGCTTCAGTACTGTAGTAGGTCACAGCACAAGTGTGGAAAATAGCATTCTTTAGTTGATCAGGTGTGATACAGGATTTCCTTCTGGCCATATAACCACCTCGGAGCTGAGAACGGAGCCCAGAATGTTCCCTCCAATCAGGCCTCTCTCCGCCCCGTACATCCACCAGGTGAGGATAACAGCGGCTCAATTCTCCAGAAAGAAAGCATTCCCTTTCTGCTCCCGACCAGCCTCCTCTCAGGTGTTGCCCCAGTTCATTTCCAATGGCAACAGAGTGCACTGAACAGCCAGTAGTAAGCACTACTCTTCCACACAGAATAAGAAACAGATTGAGTCTCCTTTACACTGTCAAAAGAGCTGCCTTTTTCTCCTCCAGATTGTCTTTGTTAGTGGATGTTACTTTCTCTTCCTCCATCCACCTGTTGCCTTCCCG

Function

NR:

description
ras-related protein Rab-19-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954626 True 925 lncRNA 0.49 1 11283196 11284120

Neighbor

gene id symbol gene type direction distance location
LOC118942876 fgl2 coding upstream 82247 11194545 ~ 11200949 (+)
LOC110531908 LOC106594049 coding upstream 144383 11103180 ~ 11138813 (+)
LOC118942875 NA coding upstream 170521 11112212 ~ 11112675 (+)
LOC118942874 LOC106609820 coding upstream 380627 10900849 ~ 10902569 (+)
LOC110510616 NA coding upstream 486205 10794769 ~ 10796991 (+)
LOC110499797 LOC106596128 coding downstream 27070 11311190 ~ 11316722 (+)
LOC110499792 LOC106595912 coding downstream 57516 11341636 ~ 11354995 (+)
LOC110518478 lsm8 coding downstream 71878 11355998 ~ 11359023 (+)
LOC110490628 LOC106609728 coding downstream 126331 11410451 ~ 11414640 (+)
LOC110503752 LOC106576575 coding downstream 148164 11432284 ~ 11468646 (+)
G1706655 NA non-coding upstream 5724 11276700 ~ 11277472 (+)
G1706654 NA non-coding upstream 6604 11276050 ~ 11276592 (+)
G1706653 LOC106592662 non-coding upstream 7417 11274946 ~ 11275779 (+)
G1706649 NA non-coding upstream 21924 11261057 ~ 11261272 (+)
G1706624 NA non-coding upstream 65809 11217008 ~ 11217387 (+)
G1706678 NA non-coding downstream 14744 11298864 ~ 11335045 (+)
G1706684 NA non-coding downstream 33003 11317123 ~ 11317792 (+)
G1706694 NA non-coding downstream 42116 11326236 ~ 11326720 (+)
G1706665 NA non-coding downstream 79036 11363156 ~ 11433934 (+)
G1706708 NA non-coding downstream 86011 11370131 ~ 11383885 (+)
G1706652 NA other upstream 10723 11270729 ~ 11272473 (+)
G1706152 NA other upstream 1147812 10134388 ~ 10135384 (+)
G1706090 NA other upstream 1365177 9915713 ~ 9918019 (+)
G1706013 NA other upstream 1529723 9748185 ~ 9753473 (+)
G1706711 NA other downstream 113920 11398040 ~ 11399288 (+)
G1707493 LOC106609754 other downstream 284309 11568429 ~ 11568956 (+)
G1707462 NA other downstream 369781 11653901 ~ 11654623 (+)
G1707772 LOC106576513 other downstream 579542 11863662 ~ 11864573 (+)
G1708014 NA other downstream 963908 12248028 ~ 12250124 (+)

Expression


Co-expression Network