Gene
RNA
| Item | Value |
|---|---|
| gene id | G1706708 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 11370131 ~ 11383885 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1954693 | False | 316 | lncRNA | 0.40 | 2 | 11370131 | 11383885 |
| TU1954694 | True | 318 | lncRNA | 0.40 | 2 | 11370131 | 11383885 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110518478 | lsm8 | coding | upstream | 11108 | 11355998 ~ 11359023 (+) |
| LOC110499792 | LOC106595912 | coding | upstream | 15136 | 11341636 ~ 11354995 (+) |
| LOC110499797 | LOC106596128 | coding | upstream | 53409 | 11311190 ~ 11316722 (+) |
| LOC118942876 | fgl2 | coding | upstream | 169182 | 11194545 ~ 11200949 (+) |
| LOC118942875 | NA | coding | upstream | 257456 | 11112212 ~ 11112675 (+) |
| LOC110490628 | LOC106609728 | coding | downstream | 26566 | 11410451 ~ 11414640 (+) |
| LOC110503752 | LOC106576575 | coding | downstream | 48399 | 11432284 ~ 11468646 (+) |
| nrcama | LOC105024872 | coding | downstream | 95895 | 11479780 ~ 11624211 (+) |
| cntn1b | LOC106593403 | coding | downstream | 246547 | 11630432 ~ 11660551 (+) |
| LOC110515322 | LOC106576579 | coding | downstream | 340541 | 11724426 ~ 11797595 (+) |
| G1706678 | NA | non-coding | upstream | 35086 | 11298864 ~ 11335045 (+) |
| G1706694 | NA | non-coding | upstream | 43411 | 11326236 ~ 11326720 (+) |
| G1706684 | NA | non-coding | upstream | 52339 | 11317123 ~ 11317792 (+) |
| G1706657 | NA | non-coding | upstream | 86011 | 11283196 ~ 11284120 (+) |
| G1706655 | NA | non-coding | upstream | 92659 | 11276700 ~ 11277472 (+) |
| G1706710 | NA | non-coding | downstream | 2848 | 11386733 ~ 11403507 (+) |
| G1706662 | NA | non-coding | downstream | 12624 | 11396509 ~ 11397615 (+) |
| G1706723 | NA | non-coding | downstream | 34787 | 11418672 ~ 11419205 (+) |
| G1706735 | NA | non-coding | downstream | 89586 | 11473471 ~ 11474136 (+) |
| G1706652 | NA | other | upstream | 97658 | 11270729 ~ 11272473 (+) |
| LOC110531908 | LOC106594049 | other | upstream | 253706 | 11103180 ~ 11138813 (+) |
| G1706152 | NA | other | upstream | 1234747 | 10134388 ~ 10135384 (+) |
| G1706090 | NA | other | upstream | 1452112 | 9915713 ~ 9918019 (+) |
| G1706013 | NA | other | upstream | 1616658 | 9748185 ~ 9753473 (+) |
| G1706711 | NA | other | downstream | 14155 | 11398040 ~ 11399288 (+) |
| G1707493 | LOC106609754 | other | downstream | 184544 | 11568429 ~ 11568956 (+) |
| G1707462 | NA | other | downstream | 270016 | 11653901 ~ 11654623 (+) |
| G1707772 | LOC106576513 | other | downstream | 479777 | 11863662 ~ 11864573 (+) |
| G1708014 | NA | other | downstream | 864143 | 12248028 ~ 12250124 (+) |
