G1706735


Basic Information

Item Value
gene id G1706735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11473471 ~ 11474136 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1954738
TGCACAAATGTCGATTCTGTAATTGCACTGGGTGATCCCAGTAGAAATTTATTTTTGAAGGGAGATCTGTCTGTCTAATTCTGGAAGAGAGCAAACTACTACAACACACCAGACAGATACCGTCagtacacacaccaacacagatgTCAACAACAGCTCTGAGTCTGATAAAGGGCCCAGCAGCAATATTCTCAAGTTCATGATGTACATATCTAATGTTCTTCCCTGAGTCTGAGTCTGTCTTGTCTGAGTCTAATGTTCTTCTCTGAGTCTGACCGACACCTCACTTAGTGACAGGACTATGCCCTACGTCTTATGAATGAACTGTGTTGTCAAGGGTTACACATAAGAACTAGACCTAATGAGGTAATACAGATGAATGTTTCTGCCTTAGCCACATTCTGACAGTTGTTTCAAGTCGGAGATGTAACTAATGATTCTGGTCCAGACGGTGCCGCTACACCGCCAGGATCCTAATTAATGGACTCATCAACTGTGAGGGatactgtgtgtgttgtctccTAATGGTGTTCCCTAGCAACCATCTCTCCTCCACAATGTACTGCTGGTGTGCATCCTCATGTTCTCCACATTCTCC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1954738 True 598 lncRNA 0.44 2 11473471 11474136

Neighbor

gene id symbol gene type direction distance location
LOC110503752 LOC106576575 coding upstream 4825 11432284 ~ 11468646 (+)
LOC110490628 LOC106609728 coding upstream 58831 11410451 ~ 11414640 (+)
LOC110518478 lsm8 coding upstream 114448 11355998 ~ 11359023 (+)
LOC110499792 LOC106595912 coding upstream 118476 11341636 ~ 11354995 (+)
LOC110499797 LOC106596128 coding upstream 156749 11311190 ~ 11316722 (+)
nrcama LOC105024872 coding downstream 5644 11479780 ~ 11624211 (+)
cntn1b LOC106593403 coding downstream 156296 11630432 ~ 11660551 (+)
LOC110515322 LOC106576579 coding downstream 250290 11724426 ~ 11797595 (+)
pphln1 LOC106593546 coding downstream 416594 11890730 ~ 11931253 (+)
LOC118943005 LOC106592567 coding downstream 894733 12368869 ~ 12384112 (+)
G1706665 NA non-coding upstream 39537 11363156 ~ 11433934 (+)
G1706723 NA non-coding upstream 54266 11418672 ~ 11419205 (+)
G1706710 NA non-coding upstream 69964 11386733 ~ 11403507 (+)
G1706662 NA non-coding upstream 75856 11396509 ~ 11397615 (+)
G1706737 NA non-coding downstream 3128 11477264 ~ 11477469 (+)
G1707481 NA non-coding downstream 63765 11537901 ~ 11539687 (+)
G1707494 NA non-coding downstream 95593 11569729 ~ 11573981 (+)
G1707495 NA non-coding downstream 99146 11573282 ~ 11574039 (+)
G1707497 NA non-coding downstream 104526 11578662 ~ 11579435 (+)
G1706711 NA other upstream 74183 11398040 ~ 11399288 (+)
G1706652 NA other upstream 200998 11270729 ~ 11272473 (+)
LOC110531908 LOC106594049 other upstream 357046 11103180 ~ 11138813 (+)
G1706152 NA other upstream 1338087 10134388 ~ 10135384 (+)
G1706090 NA other upstream 1555452 9915713 ~ 9918019 (+)
G1707493 LOC106609754 other downstream 94293 11568429 ~ 11568956 (+)
G1707462 NA other downstream 179765 11653901 ~ 11654623 (+)
G1707772 LOC106576513 other downstream 389526 11863662 ~ 11864573 (+)
G1708014 NA other downstream 773892 12248028 ~ 12250124 (+)
G1708323 NA other downstream 1104472 12578608 ~ 12584156 (+)

Expression


Co-expression Network