Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707495 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 11573282 ~ 11574039 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1955775 | True | 390 | lncRNA | 0.47 | 2 | 11573282 | 11574039 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503752 | LOC106576575 | coding | upstream | 104636 | 11432284 ~ 11468646 (+) |
| LOC110490628 | LOC106609728 | coding | upstream | 158642 | 11410451 ~ 11414640 (+) |
| LOC110518478 | lsm8 | coding | upstream | 214259 | 11355998 ~ 11359023 (+) |
| LOC110499792 | LOC106595912 | coding | upstream | 218287 | 11341636 ~ 11354995 (+) |
| LOC110499797 | LOC106596128 | coding | upstream | 256560 | 11311190 ~ 11316722 (+) |
| cntn1b | LOC106593403 | coding | downstream | 56393 | 11630432 ~ 11660551 (+) |
| LOC110515322 | LOC106576579 | coding | downstream | 150387 | 11724426 ~ 11797595 (+) |
| pphln1 | LOC106593546 | coding | downstream | 316691 | 11890730 ~ 11931253 (+) |
| LOC118943005 | LOC106592567 | coding | downstream | 794830 | 12368869 ~ 12384112 (+) |
| LOC118942882 | LOC106609674 | coding | downstream | 817590 | 12391629 ~ 12421266 (+) |
| G1707481 | NA | non-coding | upstream | 33595 | 11537901 ~ 11539687 (+) |
| G1706737 | NA | non-coding | upstream | 95813 | 11477264 ~ 11477469 (+) |
| G1706735 | NA | non-coding | upstream | 99146 | 11473471 ~ 11474136 (+) |
| G1706723 | NA | non-coding | upstream | 154077 | 11418672 ~ 11419205 (+) |
| G1707497 | NA | non-coding | downstream | 4623 | 11578662 ~ 11579435 (+) |
| G1707504 | NA | non-coding | downstream | 33607 | 11607646 ~ 11607925 (+) |
| G1707509 | NA | non-coding | downstream | 44920 | 11618959 ~ 11622767 (+) |
| G1707461 | NA | non-coding | downstream | 80885 | 11654924 ~ 11656704 (+) |
| G1707515 | NA | non-coding | downstream | 88666 | 11662705 ~ 11663646 (+) |
| G1707493 | LOC106609754 | other | upstream | 4326 | 11568429 ~ 11568956 (+) |
| G1706711 | NA | other | upstream | 173994 | 11398040 ~ 11399288 (+) |
| G1706652 | NA | other | upstream | 300809 | 11270729 ~ 11272473 (+) |
| LOC110531908 | LOC106594049 | other | upstream | 456857 | 11103180 ~ 11138813 (+) |
| G1706152 | NA | other | upstream | 1437898 | 10134388 ~ 10135384 (+) |
| G1707462 | NA | other | downstream | 79862 | 11653901 ~ 11654623 (+) |
| G1707772 | LOC106576513 | other | downstream | 289623 | 11863662 ~ 11864573 (+) |
| G1708014 | NA | other | downstream | 673989 | 12248028 ~ 12250124 (+) |
| G1708323 | NA | other | downstream | 1004569 | 12578608 ~ 12584156 (+) |
| G1708367 | NA | other | downstream | 1075647 | 12649686 ~ 12651577 (+) |
