Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707522 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 11668947 ~ 11669233 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1955806 | True | 287 | lncRNA | 0.52 | 1 | 11668947 | 11669233 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cntn1b | LOC106593403 | coding | upstream | 8396 | 11630432 ~ 11660551 (+) |
| nrcama | LOC105024872 | coding | upstream | 44736 | 11479780 ~ 11624211 (+) |
| LOC110503752 | LOC106576575 | coding | upstream | 200301 | 11432284 ~ 11468646 (+) |
| LOC110490628 | LOC106609728 | coding | upstream | 254307 | 11410451 ~ 11414640 (+) |
| LOC110518478 | lsm8 | coding | upstream | 309924 | 11355998 ~ 11359023 (+) |
| LOC110515322 | LOC106576579 | coding | downstream | 55193 | 11724426 ~ 11797595 (+) |
| pphln1 | LOC106593546 | coding | downstream | 221497 | 11890730 ~ 11931253 (+) |
| LOC118943005 | LOC106592567 | coding | downstream | 699636 | 12368869 ~ 12384112 (+) |
| LOC118942882 | LOC106609674 | coding | downstream | 722396 | 12391629 ~ 12421266 (+) |
| LOC110490813 | LOC106576520 | coding | downstream | 728567 | 12397800 ~ 12401053 (+) |
| G1707515 | NA | non-coding | upstream | 5301 | 11662705 ~ 11663646 (+) |
| G1707461 | NA | non-coding | upstream | 12243 | 11654924 ~ 11656704 (+) |
| G1707509 | NA | non-coding | upstream | 46180 | 11618959 ~ 11622767 (+) |
| G1707504 | NA | non-coding | upstream | 61022 | 11607646 ~ 11607925 (+) |
| G1707497 | NA | non-coding | upstream | 89512 | 11578662 ~ 11579435 (+) |
| G1707527 | NA | non-coding | downstream | 12575 | 11681808 ~ 11683020 (+) |
| G1707533 | NA | non-coding | downstream | 27546 | 11696779 ~ 11697038 (+) |
| G1707535 | NA | non-coding | downstream | 31635 | 11700868 ~ 11701085 (+) |
| G1707539 | NA | non-coding | downstream | 39629 | 11708862 ~ 11709097 (+) |
| G1707541 | NA | non-coding | downstream | 40645 | 11709878 ~ 11710101 (+) |
| G1707462 | NA | other | upstream | 14324 | 11653901 ~ 11654623 (+) |
| G1707493 | LOC106609754 | other | upstream | 99991 | 11568429 ~ 11568956 (+) |
| G1706711 | NA | other | upstream | 269659 | 11398040 ~ 11399288 (+) |
| G1706652 | NA | other | upstream | 396474 | 11270729 ~ 11272473 (+) |
| LOC110531908 | LOC106594049 | other | upstream | 552522 | 11103180 ~ 11138813 (+) |
| G1707772 | LOC106576513 | other | downstream | 194429 | 11863662 ~ 11864573 (+) |
| G1708014 | NA | other | downstream | 578795 | 12248028 ~ 12250124 (+) |
| G1708323 | NA | other | downstream | 909375 | 12578608 ~ 12584156 (+) |
| G1708367 | NA | other | downstream | 980453 | 12649686 ~ 12651577 (+) |
| G1708495 | NA | other | downstream | 1114974 | 12784207 ~ 12785502 (+) |
