Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707535 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 11700868 ~ 11701085 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1955829 | True | 218 | lncRNA | 0.44 | 1 | 11700868 | 11701085 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cntn1b | LOC106593403 | coding | upstream | 40317 | 11630432 ~ 11660551 (+) |
| nrcama | LOC105024872 | coding | upstream | 76657 | 11479780 ~ 11624211 (+) |
| LOC110503752 | LOC106576575 | coding | upstream | 232222 | 11432284 ~ 11468646 (+) |
| LOC110490628 | LOC106609728 | coding | upstream | 286228 | 11410451 ~ 11414640 (+) |
| LOC110518478 | lsm8 | coding | upstream | 341845 | 11355998 ~ 11359023 (+) |
| LOC110515322 | LOC106576579 | coding | downstream | 23341 | 11724426 ~ 11797595 (+) |
| pphln1 | LOC106593546 | coding | downstream | 189645 | 11890730 ~ 11931253 (+) |
| LOC118943005 | LOC106592567 | coding | downstream | 667784 | 12368869 ~ 12384112 (+) |
| LOC118942882 | LOC106609674 | coding | downstream | 690544 | 12391629 ~ 12421266 (+) |
| LOC110490813 | LOC106576520 | coding | downstream | 696715 | 12397800 ~ 12401053 (+) |
| G1707533 | NA | non-coding | upstream | 3830 | 11696779 ~ 11697038 (+) |
| G1707527 | NA | non-coding | upstream | 17848 | 11681808 ~ 11683020 (+) |
| G1707522 | NA | non-coding | upstream | 31635 | 11668947 ~ 11669233 (+) |
| G1707515 | NA | non-coding | upstream | 37222 | 11662705 ~ 11663646 (+) |
| G1707461 | NA | non-coding | upstream | 44164 | 11654924 ~ 11656704 (+) |
| G1707539 | NA | non-coding | downstream | 7777 | 11708862 ~ 11709097 (+) |
| G1707541 | NA | non-coding | downstream | 8793 | 11709878 ~ 11710101 (+) |
| G1707543 | NA | non-coding | downstream | 12930 | 11714015 ~ 11714302 (+) |
| G1707716 | NA | non-coding | downstream | 105781 | 11806866 ~ 11807317 (+) |
| G1707717 | NA | non-coding | downstream | 107226 | 11808311 ~ 11808721 (+) |
| G1707462 | NA | other | upstream | 46245 | 11653901 ~ 11654623 (+) |
| G1707493 | LOC106609754 | other | upstream | 131912 | 11568429 ~ 11568956 (+) |
| G1706711 | NA | other | upstream | 301580 | 11398040 ~ 11399288 (+) |
| G1706652 | NA | other | upstream | 428395 | 11270729 ~ 11272473 (+) |
| LOC110531908 | LOC106594049 | other | upstream | 584443 | 11103180 ~ 11138813 (+) |
| G1707772 | LOC106576513 | other | downstream | 162577 | 11863662 ~ 11864573 (+) |
| G1708014 | NA | other | downstream | 546943 | 12248028 ~ 12250124 (+) |
| G1708323 | NA | other | downstream | 877523 | 12578608 ~ 12584156 (+) |
| G1708367 | NA | other | downstream | 948601 | 12649686 ~ 12651577 (+) |
| G1708495 | NA | other | downstream | 1083122 | 12784207 ~ 12785502 (+) |
