G1707543


Basic Information

Item Value
gene id G1707543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11714015 ~ 11714302 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1955837
ctctctctctctctctctctctatctcatggCCTGTATCtctgaatatacagtatgtcttgaTCATCCATCTATTTGATCTCTATTGATTGAACCAGAGTTAGCTGCATTGCTCATGTCCAGCTCGTGTCTATCGGTGCTCCTATATAGTAACCACTGTACCTGTTGTGAAATGGATTCAGAGTGATATTGAATAGGTCATCTAGCCTTTGTTAAGACGTATCCCCGTAATACAGGATGGTCTTTGTGGGAACTGTAAAGTTTTTATGGGTCATTGGGGGACTAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1955837 True 288 lncRNA 0.42 1 11714015 11714302

Neighbor

gene id symbol gene type direction distance location
cntn1b LOC106593403 coding upstream 53464 11630432 ~ 11660551 (+)
nrcama LOC105024872 coding upstream 89804 11479780 ~ 11624211 (+)
LOC110503752 LOC106576575 coding upstream 245369 11432284 ~ 11468646 (+)
LOC110490628 LOC106609728 coding upstream 299375 11410451 ~ 11414640 (+)
LOC110518478 lsm8 coding upstream 354992 11355998 ~ 11359023 (+)
LOC110515322 LOC106576579 coding downstream 10124 11724426 ~ 11797595 (+)
pphln1 LOC106593546 coding downstream 176428 11890730 ~ 11931253 (+)
LOC118943005 LOC106592567 coding downstream 654567 12368869 ~ 12384112 (+)
LOC118942882 LOC106609674 coding downstream 677327 12391629 ~ 12421266 (+)
LOC110490813 LOC106576520 coding downstream 683498 12397800 ~ 12401053 (+)
G1707541 NA non-coding upstream 3914 11709878 ~ 11710101 (+)
G1707539 NA non-coding upstream 4918 11708862 ~ 11709097 (+)
G1707535 NA non-coding upstream 12930 11700868 ~ 11701085 (+)
G1707533 NA non-coding upstream 16977 11696779 ~ 11697038 (+)
G1707527 NA non-coding upstream 30995 11681808 ~ 11683020 (+)
G1707716 NA non-coding downstream 92564 11806866 ~ 11807317 (+)
G1707717 NA non-coding downstream 94009 11808311 ~ 11808721 (+)
G1707741 NA non-coding downstream 123303 11837605 ~ 11837808 (+)
G1707743 NA non-coding downstream 124101 11838403 ~ 11838656 (+)
G1707763 NA non-coding downstream 145786 11860088 ~ 11860296 (+)
G1707462 NA other upstream 59392 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 145059 11568429 ~ 11568956 (+)
G1706711 NA other upstream 314727 11398040 ~ 11399288 (+)
G1706652 NA other upstream 441542 11270729 ~ 11272473 (+)
LOC110531908 LOC106594049 other upstream 597590 11103180 ~ 11138813 (+)
G1707772 LOC106576513 other downstream 149360 11863662 ~ 11864573 (+)
G1708014 NA other downstream 533726 12248028 ~ 12250124 (+)
G1708323 NA other downstream 864306 12578608 ~ 12584156 (+)
G1708367 NA other downstream 935384 12649686 ~ 12651577 (+)
G1708495 NA other downstream 1069905 12784207 ~ 12785502 (+)

Expression


Co-expression Network