G1707716


Basic Information

Item Value
gene id G1707716
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11806866 ~ 11807317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956109
gttaaggtcaaccctgttactgtcaaccctgttacggtcaaccctgttacggtcaaccctgttacggtcaaccctgttacggtcaaccctgttaaggtcaaccctgttacggtcaaccctgttacggtcaaccctgttaaggtcaaccctgttactttatttgcaCATAATAGGCAGTTACTGTGGTATTTTTTTGCAAtgtaacctcttgagatgggagaacgttattttttgttgttgtctctacTACTGAGTTAATGACAGATTAGGGCCAGCTAATGACTATGACAATATCCCATTAATTATGCCTTCATCGTCACAGCCCATAATTATCATCCAATTAATGGATcgttaaaagtttttttttttatgtagaaAGGGAACATTTATCATTGTTGTTTGTTCAGCTGAAGGACAACTAGCAATGCAACGTTAATACACATGTATTATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956109 True 452 lncRNA 0.39 1 11806866 11807317

Neighbor

gene id symbol gene type direction distance location
LOC110515322 LOC106576579 coding upstream 9271 11724426 ~ 11797595 (+)
cntn1b LOC106593403 coding upstream 146315 11630432 ~ 11660551 (+)
nrcama LOC105024872 coding upstream 182655 11479780 ~ 11624211 (+)
LOC110503752 LOC106576575 coding upstream 338220 11432284 ~ 11468646 (+)
LOC110490628 LOC106609728 coding upstream 392226 11410451 ~ 11414640 (+)
pphln1 LOC106593546 coding downstream 83413 11890730 ~ 11931253 (+)
LOC118943005 LOC106592567 coding downstream 561552 12368869 ~ 12384112 (+)
LOC118942882 LOC106609674 coding downstream 584312 12391629 ~ 12421266 (+)
LOC110490813 LOC106576520 coding downstream 590483 12397800 ~ 12401053 (+)
LOC118936492 LOC106609674 coding downstream 601236 12408553 ~ 12415265 (+)
G1707543 NA non-coding upstream 92564 11714015 ~ 11714302 (+)
G1707541 NA non-coding upstream 96765 11709878 ~ 11710101 (+)
G1707539 NA non-coding upstream 97769 11708862 ~ 11709097 (+)
G1707535 NA non-coding upstream 105781 11700868 ~ 11701085 (+)
G1707533 NA non-coding upstream 109828 11696779 ~ 11697038 (+)
G1707717 NA non-coding downstream 994 11808311 ~ 11808721 (+)
G1707741 NA non-coding downstream 30288 11837605 ~ 11837808 (+)
G1707743 NA non-coding downstream 31086 11838403 ~ 11838656 (+)
G1707763 NA non-coding downstream 52771 11860088 ~ 11860296 (+)
G1707768 NA non-coding downstream 81260 11888577 ~ 11889265 (+)
G1707462 NA other upstream 152243 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 237910 11568429 ~ 11568956 (+)
G1706711 NA other upstream 407578 11398040 ~ 11399288 (+)
G1706652 NA other upstream 534393 11270729 ~ 11272473 (+)
LOC110531908 LOC106594049 other upstream 690441 11103180 ~ 11138813 (+)
G1707772 LOC106576513 other downstream 56345 11863662 ~ 11864573 (+)
G1708014 NA other downstream 440711 12248028 ~ 12250124 (+)
G1708323 NA other downstream 771291 12578608 ~ 12584156 (+)
G1708367 NA other downstream 842369 12649686 ~ 12651577 (+)
G1708495 NA other downstream 976890 12784207 ~ 12785502 (+)

Expression


Co-expression Network