Item | Value |
---|---|
gene id | G1707717 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 11808311 ~ 11808721 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1956110 | True | 411 | lncRNA | 0.39 | 1 | 11808311 | 11808721 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110515322 | LOC106576579 | coding | upstream | 10716 | 11724426 ~ 11797595 (+) |
cntn1b | LOC106593403 | coding | upstream | 147760 | 11630432 ~ 11660551 (+) |
nrcama | LOC105024872 | coding | upstream | 184100 | 11479780 ~ 11624211 (+) |
LOC110503752 | LOC106576575 | coding | upstream | 339665 | 11432284 ~ 11468646 (+) |
LOC110490628 | LOC106609728 | coding | upstream | 393671 | 11410451 ~ 11414640 (+) |
pphln1 | LOC106593546 | coding | downstream | 82009 | 11890730 ~ 11931253 (+) |
LOC118943005 | LOC106592567 | coding | downstream | 560148 | 12368869 ~ 12384112 (+) |
LOC118942882 | LOC106609674 | coding | downstream | 582908 | 12391629 ~ 12421266 (+) |
LOC110490813 | LOC106576520 | coding | downstream | 589079 | 12397800 ~ 12401053 (+) |
LOC118936492 | LOC106609674 | coding | downstream | 599832 | 12408553 ~ 12415265 (+) |
G1707716 | NA | non-coding | upstream | 994 | 11806866 ~ 11807317 (+) |
G1707543 | NA | non-coding | upstream | 94009 | 11714015 ~ 11714302 (+) |
G1707541 | NA | non-coding | upstream | 98210 | 11709878 ~ 11710101 (+) |
G1707539 | NA | non-coding | upstream | 99214 | 11708862 ~ 11709097 (+) |
G1707535 | NA | non-coding | upstream | 107226 | 11700868 ~ 11701085 (+) |
G1707741 | NA | non-coding | downstream | 28884 | 11837605 ~ 11837808 (+) |
G1707743 | NA | non-coding | downstream | 29682 | 11838403 ~ 11838656 (+) |
G1707763 | NA | non-coding | downstream | 51367 | 11860088 ~ 11860296 (+) |
G1707768 | NA | non-coding | downstream | 79856 | 11888577 ~ 11889265 (+) |
G1707462 | NA | other | upstream | 153688 | 11653901 ~ 11654623 (+) |
G1707493 | LOC106609754 | other | upstream | 239355 | 11568429 ~ 11568956 (+) |
G1706711 | NA | other | upstream | 409023 | 11398040 ~ 11399288 (+) |
G1706652 | NA | other | upstream | 535838 | 11270729 ~ 11272473 (+) |
LOC110531908 | LOC106594049 | other | upstream | 691886 | 11103180 ~ 11138813 (+) |
G1707772 | LOC106576513 | other | downstream | 54941 | 11863662 ~ 11864573 (+) |
G1708014 | NA | other | downstream | 439307 | 12248028 ~ 12250124 (+) |
G1708323 | NA | other | downstream | 769887 | 12578608 ~ 12584156 (+) |
G1708367 | NA | other | downstream | 840965 | 12649686 ~ 12651577 (+) |
G1708495 | NA | other | downstream | 975486 | 12784207 ~ 12785502 (+) |