G1707717



Basic Information


Item Value
gene id G1707717
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 11808311 ~ 11808721 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1956110
agagagagagagagagggtgaggacaaTAGTGAGTGTATGTTGTATCTGTATACAGAGGTTAGAGTATTCAGGTTgacaggtatagactcttagctgtatagtgttatggtcaggtatagactcttagctgtatagtgttatggtcaggtatagactcttagctgtatagtgttatggtcaggtatagactcttagctgtatagtgttatggtcaggtatagactcttagctgtatagtgttgtggtcaggtatagactcttagctgtatagtgttatggtcaggtatagactcttagctgtatagtgttgtggtcaggtatagactcttagctgtatagtgttatggtcaggtatagactcttagtcttatagtgttgtggtcaggtatagactcttagctgtatagtgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1956110 True 411 lncRNA 0.39 1 11808311 11808721

Neighbor


gene id symbol gene type direction distance location
LOC110515322 LOC106576579 coding upstream 10716 11724426 ~ 11797595 (+)
cntn1b LOC106593403 coding upstream 147760 11630432 ~ 11660551 (+)
nrcama LOC105024872 coding upstream 184100 11479780 ~ 11624211 (+)
LOC110503752 LOC106576575 coding upstream 339665 11432284 ~ 11468646 (+)
LOC110490628 LOC106609728 coding upstream 393671 11410451 ~ 11414640 (+)
pphln1 LOC106593546 coding downstream 82009 11890730 ~ 11931253 (+)
LOC118943005 LOC106592567 coding downstream 560148 12368869 ~ 12384112 (+)
LOC118942882 LOC106609674 coding downstream 582908 12391629 ~ 12421266 (+)
LOC110490813 LOC106576520 coding downstream 589079 12397800 ~ 12401053 (+)
LOC118936492 LOC106609674 coding downstream 599832 12408553 ~ 12415265 (+)
G1707716 NA non-coding upstream 994 11806866 ~ 11807317 (+)
G1707543 NA non-coding upstream 94009 11714015 ~ 11714302 (+)
G1707541 NA non-coding upstream 98210 11709878 ~ 11710101 (+)
G1707539 NA non-coding upstream 99214 11708862 ~ 11709097 (+)
G1707535 NA non-coding upstream 107226 11700868 ~ 11701085 (+)
G1707741 NA non-coding downstream 28884 11837605 ~ 11837808 (+)
G1707743 NA non-coding downstream 29682 11838403 ~ 11838656 (+)
G1707763 NA non-coding downstream 51367 11860088 ~ 11860296 (+)
G1707768 NA non-coding downstream 79856 11888577 ~ 11889265 (+)
G1707462 NA other upstream 153688 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 239355 11568429 ~ 11568956 (+)
G1706711 NA other upstream 409023 11398040 ~ 11399288 (+)
G1706652 NA other upstream 535838 11270729 ~ 11272473 (+)
LOC110531908 LOC106594049 other upstream 691886 11103180 ~ 11138813 (+)
G1707772 LOC106576513 other downstream 54941 11863662 ~ 11864573 (+)
G1708014 NA other downstream 439307 12248028 ~ 12250124 (+)
G1708323 NA other downstream 769887 12578608 ~ 12584156 (+)
G1708367 NA other downstream 840965 12649686 ~ 12651577 (+)
G1708495 NA other downstream 975486 12784207 ~ 12785502 (+)

Expression



Co-expression Network