Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707785 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 11911962 ~ 11912473 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1956192 | True | 462 | lncRNA | 0.50 | 2 | 11911962 | 11912473 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515322 | LOC106576579 | coding | upstream | 114367 | 11724426 ~ 11797595 (+) |
| cntn1b | LOC106593403 | coding | upstream | 251411 | 11630432 ~ 11660551 (+) |
| nrcama | LOC105024872 | coding | upstream | 287751 | 11479780 ~ 11624211 (+) |
| LOC110503752 | LOC106576575 | coding | upstream | 443316 | 11432284 ~ 11468646 (+) |
| LOC110490628 | LOC106609728 | coding | upstream | 497322 | 11410451 ~ 11414640 (+) |
| LOC118943005 | LOC106592567 | coding | downstream | 456396 | 12368869 ~ 12384112 (+) |
| LOC118942882 | LOC106609674 | coding | downstream | 479156 | 12391629 ~ 12421266 (+) |
| LOC110490813 | LOC106576520 | coding | downstream | 485327 | 12397800 ~ 12401053 (+) |
| LOC118936492 | LOC106609674 | coding | downstream | 496080 | 12408553 ~ 12415265 (+) |
| LOC110490708 | LOC106576521 | coding | downstream | 504963 | 12417436 ~ 12419416 (+) |
| G1707784 | NA | non-coding | upstream | 3523 | 11908146 ~ 11908439 (+) |
| G1707783 | NA | non-coding | upstream | 14889 | 11896774 ~ 11897073 (+) |
| G1707768 | NA | non-coding | upstream | 22697 | 11888577 ~ 11889265 (+) |
| G1707763 | NA | non-coding | upstream | 51666 | 11860088 ~ 11860296 (+) |
| G1707743 | NA | non-coding | upstream | 73306 | 11838403 ~ 11838656 (+) |
| G1707765 | NA | non-coding | downstream | 18798 | 11931271 ~ 11932509 (+) |
| G1707892 | NA | non-coding | downstream | 112647 | 12025120 ~ 12025345 (+) |
| G1707895 | NA | non-coding | downstream | 115432 | 12027905 ~ 12028172 (+) |
| G1707896 | NA | non-coding | downstream | 116025 | 12028498 ~ 12029646 (+) |
| G1707899 | NA | non-coding | downstream | 125603 | 12038076 ~ 12038357 (+) |
| G1707772 | LOC106576513 | other | upstream | 47389 | 11863662 ~ 11864573 (+) |
| G1707462 | NA | other | upstream | 257339 | 11653901 ~ 11654623 (+) |
| G1707493 | LOC106609754 | other | upstream | 343006 | 11568429 ~ 11568956 (+) |
| G1706711 | NA | other | upstream | 512674 | 11398040 ~ 11399288 (+) |
| G1706652 | NA | other | upstream | 639489 | 11270729 ~ 11272473 (+) |
| G1708014 | NA | other | downstream | 335555 | 12248028 ~ 12250124 (+) |
| G1708323 | NA | other | downstream | 666135 | 12578608 ~ 12584156 (+) |
| G1708367 | NA | other | downstream | 737213 | 12649686 ~ 12651577 (+) |
| G1708495 | NA | other | downstream | 871734 | 12784207 ~ 12785502 (+) |
| LOC110490810 | LOC106576597 | other | downstream | 888295 | 12745000 ~ 12825754 (+) |
