Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707892 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 12025120 ~ 12025345 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1956320 | True | 226 | lncRNA | 0.45 | 1 | 12025120 | 12025345 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pphln1 | LOC106593546 | coding | upstream | 93867 | 11890730 ~ 11931253 (+) |
| LOC110515322 | LOC106576579 | coding | upstream | 227525 | 11724426 ~ 11797595 (+) |
| cntn1b | LOC106593403 | coding | upstream | 364569 | 11630432 ~ 11660551 (+) |
| nrcama | LOC105024872 | coding | upstream | 400909 | 11479780 ~ 11624211 (+) |
| LOC110503752 | LOC106576575 | coding | upstream | 556474 | 11432284 ~ 11468646 (+) |
| LOC118943005 | LOC106592567 | coding | downstream | 343524 | 12368869 ~ 12384112 (+) |
| LOC118942882 | LOC106609674 | coding | downstream | 366284 | 12391629 ~ 12421266 (+) |
| LOC110490813 | LOC106576520 | coding | downstream | 372455 | 12397800 ~ 12401053 (+) |
| LOC118936492 | LOC106609674 | coding | downstream | 383208 | 12408553 ~ 12415265 (+) |
| LOC110490708 | LOC106576521 | coding | downstream | 392091 | 12417436 ~ 12419416 (+) |
| G1707765 | NA | non-coding | upstream | 92611 | 11931271 ~ 11932509 (+) |
| G1707785 | NA | non-coding | upstream | 112647 | 11911962 ~ 11912473 (+) |
| G1707784 | NA | non-coding | upstream | 116681 | 11908146 ~ 11908439 (+) |
| G1707783 | NA | non-coding | upstream | 128047 | 11896774 ~ 11897073 (+) |
| G1707895 | NA | non-coding | downstream | 2560 | 12027905 ~ 12028172 (+) |
| G1707896 | NA | non-coding | downstream | 3153 | 12028498 ~ 12029646 (+) |
| G1707899 | NA | non-coding | downstream | 12731 | 12038076 ~ 12038357 (+) |
| G1707906 | NA | non-coding | downstream | 18269 | 12043614 ~ 12043860 (+) |
| G1707932 | NA | non-coding | downstream | 50635 | 12075980 ~ 12076381 (+) |
| G1707772 | LOC106576513 | other | upstream | 160547 | 11863662 ~ 11864573 (+) |
| G1707462 | NA | other | upstream | 370497 | 11653901 ~ 11654623 (+) |
| G1707493 | LOC106609754 | other | upstream | 456164 | 11568429 ~ 11568956 (+) |
| G1706711 | NA | other | upstream | 625832 | 11398040 ~ 11399288 (+) |
| G1706652 | NA | other | upstream | 752647 | 11270729 ~ 11272473 (+) |
| G1708014 | NA | other | downstream | 222683 | 12248028 ~ 12250124 (+) |
| G1708323 | NA | other | downstream | 553263 | 12578608 ~ 12584156 (+) |
| G1708367 | NA | other | downstream | 624341 | 12649686 ~ 12651577 (+) |
| G1708495 | NA | other | downstream | 758862 | 12784207 ~ 12785502 (+) |
| LOC110490810 | LOC106576597 | other | downstream | 775423 | 12745000 ~ 12825754 (+) |
