Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707906 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 12043614 ~ 12043860 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1956334 | True | 247 | lncRNA | 0.57 | 1 | 12043614 | 12043860 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pphln1 | LOC106593546 | coding | upstream | 112361 | 11890730 ~ 11931253 (+) |
| LOC110515322 | LOC106576579 | coding | upstream | 246019 | 11724426 ~ 11797595 (+) |
| cntn1b | LOC106593403 | coding | upstream | 383063 | 11630432 ~ 11660551 (+) |
| nrcama | LOC105024872 | coding | upstream | 419403 | 11479780 ~ 11624211 (+) |
| LOC110503752 | LOC106576575 | coding | upstream | 574968 | 11432284 ~ 11468646 (+) |
| LOC118943005 | LOC106592567 | coding | downstream | 325009 | 12368869 ~ 12384112 (+) |
| LOC118942882 | LOC106609674 | coding | downstream | 347769 | 12391629 ~ 12421266 (+) |
| LOC110490813 | LOC106576520 | coding | downstream | 353940 | 12397800 ~ 12401053 (+) |
| LOC118936492 | LOC106609674 | coding | downstream | 364693 | 12408553 ~ 12415265 (+) |
| LOC110490708 | LOC106576521 | coding | downstream | 373576 | 12417436 ~ 12419416 (+) |
| G1707899 | NA | non-coding | upstream | 5257 | 12038076 ~ 12038357 (+) |
| G1707896 | NA | non-coding | upstream | 13968 | 12028498 ~ 12029646 (+) |
| G1707895 | NA | non-coding | upstream | 15442 | 12027905 ~ 12028172 (+) |
| G1707892 | NA | non-coding | upstream | 18269 | 12025120 ~ 12025345 (+) |
| G1707765 | NA | non-coding | upstream | 111105 | 11931271 ~ 11932509 (+) |
| G1707932 | NA | non-coding | downstream | 32120 | 12075980 ~ 12076381 (+) |
| G1707946 | NA | non-coding | downstream | 55263 | 12099123 ~ 12099364 (+) |
| G1707956 | LOC106595172 | non-coding | downstream | 73430 | 12117290 ~ 12121159 (+) |
| G1707961 | NA | non-coding | downstream | 82568 | 12126428 ~ 12128169 (+) |
| G1707966 | NA | non-coding | downstream | 99567 | 12143427 ~ 12143788 (+) |
| G1707772 | LOC106576513 | other | upstream | 179041 | 11863662 ~ 11864573 (+) |
| G1707462 | NA | other | upstream | 388991 | 11653901 ~ 11654623 (+) |
| G1707493 | LOC106609754 | other | upstream | 474658 | 11568429 ~ 11568956 (+) |
| G1706711 | NA | other | upstream | 644326 | 11398040 ~ 11399288 (+) |
| G1706652 | NA | other | upstream | 771141 | 11270729 ~ 11272473 (+) |
| G1708014 | NA | other | downstream | 204168 | 12248028 ~ 12250124 (+) |
| G1708323 | NA | other | downstream | 534748 | 12578608 ~ 12584156 (+) |
| G1708367 | NA | other | downstream | 605826 | 12649686 ~ 12651577 (+) |
| G1708495 | NA | other | downstream | 740347 | 12784207 ~ 12785502 (+) |
| LOC110490810 | LOC106576597 | other | downstream | 756908 | 12745000 ~ 12825754 (+) |
