Item | Value |
---|---|
gene id | G1707932 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048585.1 |
NCBI id | CM023239.2 |
chromosome length | 64935962 |
location | 12075980 ~ 12076381 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1956361 | True | 336 | lncRNA | 0.45 | 2 | 12075980 | 12076381 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
pphln1 | LOC106593546 | coding | upstream | 144727 | 11890730 ~ 11931253 (+) |
LOC110515322 | LOC106576579 | coding | upstream | 278385 | 11724426 ~ 11797595 (+) |
cntn1b | LOC106593403 | coding | upstream | 415429 | 11630432 ~ 11660551 (+) |
nrcama | LOC105024872 | coding | upstream | 451769 | 11479780 ~ 11624211 (+) |
LOC110503752 | LOC106576575 | coding | upstream | 607334 | 11432284 ~ 11468646 (+) |
LOC118943005 | LOC106592567 | coding | downstream | 292488 | 12368869 ~ 12384112 (+) |
LOC118942882 | LOC106609674 | coding | downstream | 315248 | 12391629 ~ 12421266 (+) |
LOC110490813 | LOC106576520 | coding | downstream | 321419 | 12397800 ~ 12401053 (+) |
LOC118936492 | LOC106609674 | coding | downstream | 332172 | 12408553 ~ 12415265 (+) |
LOC110490708 | LOC106576521 | coding | downstream | 341055 | 12417436 ~ 12419416 (+) |
G1707906 | NA | non-coding | upstream | 32120 | 12043614 ~ 12043860 (+) |
G1707899 | NA | non-coding | upstream | 37623 | 12038076 ~ 12038357 (+) |
G1707896 | NA | non-coding | upstream | 46334 | 12028498 ~ 12029646 (+) |
G1707895 | NA | non-coding | upstream | 47808 | 12027905 ~ 12028172 (+) |
G1707892 | NA | non-coding | upstream | 50635 | 12025120 ~ 12025345 (+) |
G1707946 | NA | non-coding | downstream | 22742 | 12099123 ~ 12099364 (+) |
G1707956 | LOC106595172 | non-coding | downstream | 40909 | 12117290 ~ 12121159 (+) |
G1707961 | NA | non-coding | downstream | 50047 | 12126428 ~ 12128169 (+) |
G1707966 | NA | non-coding | downstream | 67046 | 12143427 ~ 12143788 (+) |
G1707967 | NA | non-coding | downstream | 79866 | 12156247 ~ 12156955 (+) |
G1707772 | LOC106576513 | other | upstream | 211407 | 11863662 ~ 11864573 (+) |
G1707462 | NA | other | upstream | 421357 | 11653901 ~ 11654623 (+) |
G1707493 | LOC106609754 | other | upstream | 507024 | 11568429 ~ 11568956 (+) |
G1706711 | NA | other | upstream | 676692 | 11398040 ~ 11399288 (+) |
G1706652 | NA | other | upstream | 803507 | 11270729 ~ 11272473 (+) |
G1708014 | NA | other | downstream | 171647 | 12248028 ~ 12250124 (+) |
G1708323 | NA | other | downstream | 502227 | 12578608 ~ 12584156 (+) |
G1708367 | NA | other | downstream | 573305 | 12649686 ~ 12651577 (+) |
G1708495 | NA | other | downstream | 707826 | 12784207 ~ 12785502 (+) |
LOC110490810 | LOC106576597 | other | downstream | 724387 | 12745000 ~ 12825754 (+) |