G1707932



Basic Information


Item Value
gene id G1707932
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12075980 ~ 12076381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1956361
gtctctcgctatgtctctctctctgtctctctctctgtctctctctctctctgtctctctctctgtctctctctctgtctctctctatgtctctctctttgtctctctctctctctctgtctctctctgtggcttaAATTATTTCAGTTCACATCCAGCTGCTCTGATGAATGATAATTTTCTGCGTATCTGTACTGTAGCCAAATGCGATGCTGTATTGATGGATGGTAATACAAGCTGTCATTCCTGCAAGATAGGCTTAATCtattcagtgtgtgtgcgtgtgtctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1956361 True 336 lncRNA 0.45 2 12075980 12076381

Neighbor


gene id symbol gene type direction distance location
pphln1 LOC106593546 coding upstream 144727 11890730 ~ 11931253 (+)
LOC110515322 LOC106576579 coding upstream 278385 11724426 ~ 11797595 (+)
cntn1b LOC106593403 coding upstream 415429 11630432 ~ 11660551 (+)
nrcama LOC105024872 coding upstream 451769 11479780 ~ 11624211 (+)
LOC110503752 LOC106576575 coding upstream 607334 11432284 ~ 11468646 (+)
LOC118943005 LOC106592567 coding downstream 292488 12368869 ~ 12384112 (+)
LOC118942882 LOC106609674 coding downstream 315248 12391629 ~ 12421266 (+)
LOC110490813 LOC106576520 coding downstream 321419 12397800 ~ 12401053 (+)
LOC118936492 LOC106609674 coding downstream 332172 12408553 ~ 12415265 (+)
LOC110490708 LOC106576521 coding downstream 341055 12417436 ~ 12419416 (+)
G1707906 NA non-coding upstream 32120 12043614 ~ 12043860 (+)
G1707899 NA non-coding upstream 37623 12038076 ~ 12038357 (+)
G1707896 NA non-coding upstream 46334 12028498 ~ 12029646 (+)
G1707895 NA non-coding upstream 47808 12027905 ~ 12028172 (+)
G1707892 NA non-coding upstream 50635 12025120 ~ 12025345 (+)
G1707946 NA non-coding downstream 22742 12099123 ~ 12099364 (+)
G1707956 LOC106595172 non-coding downstream 40909 12117290 ~ 12121159 (+)
G1707961 NA non-coding downstream 50047 12126428 ~ 12128169 (+)
G1707966 NA non-coding downstream 67046 12143427 ~ 12143788 (+)
G1707967 NA non-coding downstream 79866 12156247 ~ 12156955 (+)
G1707772 LOC106576513 other upstream 211407 11863662 ~ 11864573 (+)
G1707462 NA other upstream 421357 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 507024 11568429 ~ 11568956 (+)
G1706711 NA other upstream 676692 11398040 ~ 11399288 (+)
G1706652 NA other upstream 803507 11270729 ~ 11272473 (+)
G1708014 NA other downstream 171647 12248028 ~ 12250124 (+)
G1708323 NA other downstream 502227 12578608 ~ 12584156 (+)
G1708367 NA other downstream 573305 12649686 ~ 12651577 (+)
G1708495 NA other downstream 707826 12784207 ~ 12785502 (+)
LOC110490810 LOC106576597 other downstream 724387 12745000 ~ 12825754 (+)

Expression



Co-expression Network