Gene
RNA
| Item | Value |
|---|---|
| gene id | G1707971 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 12165035 ~ 12165301 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1956406 | True | 267 | lncRNA | 0.49 | 1 | 12165035 | 12165301 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pphln1 | LOC106593546 | coding | upstream | 233782 | 11890730 ~ 11931253 (+) |
| LOC110515322 | LOC106576579 | coding | upstream | 367440 | 11724426 ~ 11797595 (+) |
| cntn1b | LOC106593403 | coding | upstream | 504484 | 11630432 ~ 11660551 (+) |
| nrcama | LOC105024872 | coding | upstream | 540824 | 11479780 ~ 11624211 (+) |
| LOC110503752 | LOC106576575 | coding | upstream | 696389 | 11432284 ~ 11468646 (+) |
| LOC118943005 | LOC106592567 | coding | downstream | 203568 | 12368869 ~ 12384112 (+) |
| LOC118942882 | LOC106609674 | coding | downstream | 226328 | 12391629 ~ 12421266 (+) |
| LOC110490813 | LOC106576520 | coding | downstream | 232499 | 12397800 ~ 12401053 (+) |
| LOC118936492 | LOC106609674 | coding | downstream | 243252 | 12408553 ~ 12415265 (+) |
| LOC110490708 | LOC106576521 | coding | downstream | 252135 | 12417436 ~ 12419416 (+) |
| G1707970 | NA | non-coding | upstream | 3165 | 12161533 ~ 12161870 (+) |
| G1707967 | NA | non-coding | upstream | 8080 | 12156247 ~ 12156955 (+) |
| G1707966 | NA | non-coding | upstream | 21247 | 12143427 ~ 12143788 (+) |
| G1707961 | NA | non-coding | upstream | 36866 | 12126428 ~ 12128169 (+) |
| G1707956 | LOC106595172 | non-coding | upstream | 43876 | 12117290 ~ 12121159 (+) |
| G1708135 | NA | non-coding | downstream | 168632 | 12333933 ~ 12342212 (+) |
| G1708160 | NA | non-coding | downstream | 190077 | 12355378 ~ 12355813 (+) |
| G1708165 | NA | non-coding | downstream | 196169 | 12361470 ~ 12365511 (+) |
| G1708247 | NA | non-coding | downstream | 291551 | 12456852 ~ 12457169 (+) |
| G1707772 | LOC106576513 | other | upstream | 300462 | 11863662 ~ 11864573 (+) |
| G1707462 | NA | other | upstream | 510412 | 11653901 ~ 11654623 (+) |
| G1707493 | LOC106609754 | other | upstream | 596079 | 11568429 ~ 11568956 (+) |
| G1706711 | NA | other | upstream | 765747 | 11398040 ~ 11399288 (+) |
| G1706652 | NA | other | upstream | 892562 | 11270729 ~ 11272473 (+) |
| G1708014 | NA | other | downstream | 82727 | 12248028 ~ 12250124 (+) |
| G1708323 | NA | other | downstream | 413307 | 12578608 ~ 12584156 (+) |
| G1708367 | NA | other | downstream | 484385 | 12649686 ~ 12651577 (+) |
| G1708495 | NA | other | downstream | 618906 | 12784207 ~ 12785502 (+) |
| LOC110490810 | LOC106576597 | other | downstream | 635467 | 12745000 ~ 12825754 (+) |
