G1708014


Basic Information

Item Value
gene id G1708014
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12248028 ~ 12250124 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956462
CAGGAACAAACGTTTTACTTATAACACGGTTCAAACTGCTGAGGTAACTGCTGAGGTAACTGACAAAAGTaatattattcttttttttaaatctcttcTGATGTCTGATGTGGCTTCCTTACAGTAAAGAAAATGAAAATAATACCTTTCCCACGAGTCCTAATTTAACAAGTCAGAACTGCTGCAGTGTTAGCTTTGGGCTTCGGAGTCTTTCTGAGCTCGTGGAAACAAATCAATTACAAAGGATACCCTACATAAAGCTAACCAGAGATATTGCAAAACAGCAGTCAAAAGCCAGAGGGAGGATTTGATCCAATAATGATACTGTCCATGGTTCAAAGAATGAAATTAAAATATAGTCAATAGCGCATGTTTCCATTTGTAGTGTGGTAGGAATACTTCAAAGGAATACACACAGTACTGTAGATTGGCTCTCACACCTTTAACTCCAGGATCTGCTTCATTAGGCATTCTGCTACGACACGACGAGCACGAACACTTTATACAGGACATTCTGGcttttattctctctgtgttttaTTCAAACGTTATCAGTCACATGCTCTGAATACTTTATTATATGTTATTAAAGTTACTATGCATTGACGATAACAACAGAGTAGCAggggtgtaaaagagggggaggggaaatgcaaatagtctgggtggccatttgattagaagttcaagagtcttatggtttgggggtaaaagctgtttagaagcctcttggacctagacttggcgctccggtacagcttgccgtgcggtagcagagagaacagtctatgactagggtggctggattaCGGGGTTGAGTTGAGCTCATGATCTAGGCTGACCTGGCCTGACCTGTCTGTACAGCAAATAGCAAAATATGTGTAGAGTAGGACGACAAGTCTATAAacctgtactacacacacacacacacacacacaaacacacacacacacacacacacacatacacacacacacacacacacacacacacacacacacacacacacacacacacccacacacacaaaaacacacacgcacaaacaagaAAAGCTAGATAAATTCTACCATTATGTGGTAAGTCACAAGTAAGCCACCAATGATATTCCGTATGACTGTTAACTACAGATACCTGAAAAAGTCATTCTaaattatctctctgtctctctctttccactgaaataaataatataatttctCCCTAGGAGGGGGCGGTTGGCGTCTAgctggaggatggaggatggctGGCACAGCAGGCCGCATATCTCTCACTGGCAGCAGACctacggacagacggacagacgacTAAAAATAAAGAGGAGACTTTCTTTAGATCTCTCTACAGcgctcacaccctctctctctctctctctctctctctctctctctctctctctcttaatccgcttctatctctctccctctcaggttctctccctctctcactctcagagaaGAAGCAGATTCTTCAGAACAGCATCACACATCCATAATCCTTTCATGTCTGAGTATTGCAATTCAGACTATAGCCACCAACGGTCCTGTGGTGTTGGTTTGACTGGTAGGACTATAGTCACCAACGGTCCTGTGGTGTTGGTTTGACTGGTAGGACTATAGTCACCAACGGTCCTGTGGTGTTGGTTTGACTGGTAGGACTATAGCCACCAACGGTCCTGTGGTGTTGGTTTGACTGGTAGGACTATAGTCACCAACGGTCCTGTGGTGTTGGTTTGACTGGTAGGACTATAGCCACCAACAGTCCTGTGGTGTTGGTAGGACTATAGCCACCAACAGTCCTGTGGTGTTGGTTTGACTGGTAGGACTATAGCCACCAACGGTCCTGTGGTGTTGGTTTGACTGGTAGGACTATAGCCACCAACGGTCCTGTGGTGTTGGTTTGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956462 True 1904 TUCP 0.44 2 12248028 12250124

Neighbor

gene id symbol gene type direction distance location
pphln1 LOC106593546 coding upstream 316775 11890730 ~ 11931253 (+)
LOC110515322 LOC106576579 coding upstream 450433 11724426 ~ 11797595 (+)
cntn1b LOC106593403 coding upstream 587477 11630432 ~ 11660551 (+)
nrcama LOC105024872 coding upstream 623817 11479780 ~ 11624211 (+)
LOC110503752 LOC106576575 coding upstream 779382 11432284 ~ 11468646 (+)
LOC118943005 LOC106592567 coding downstream 118745 12368869 ~ 12384112 (+)
LOC118942882 LOC106609674 coding downstream 141505 12391629 ~ 12421266 (+)
LOC110490813 LOC106576520 coding downstream 147676 12397800 ~ 12401053 (+)
LOC118936492 LOC106609674 coding downstream 158429 12408553 ~ 12415265 (+)
LOC110490708 LOC106576521 coding downstream 167312 12417436 ~ 12419416 (+)
G1707971 NA non-coding upstream 82727 12165035 ~ 12165301 (+)
G1707970 NA non-coding upstream 86158 12161533 ~ 12161870 (+)
G1707967 NA non-coding upstream 91073 12156247 ~ 12156955 (+)
G1707966 NA non-coding upstream 104240 12143427 ~ 12143788 (+)
G1707961 NA non-coding upstream 119859 12126428 ~ 12128169 (+)
G1708135 NA non-coding downstream 83809 12333933 ~ 12342212 (+)
G1708160 NA non-coding downstream 105254 12355378 ~ 12355813 (+)
G1708165 NA non-coding downstream 111346 12361470 ~ 12365511 (+)
G1708247 NA non-coding downstream 206728 12456852 ~ 12457169 (+)
G1707772 LOC106576513 other upstream 383455 11863662 ~ 11864573 (+)
G1707462 NA other upstream 593405 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 679072 11568429 ~ 11568956 (+)
G1706711 NA other upstream 848740 11398040 ~ 11399288 (+)
G1706652 NA other upstream 975555 11270729 ~ 11272473 (+)
G1708323 NA other downstream 328484 12578608 ~ 12584156 (+)
G1708367 NA other downstream 399562 12649686 ~ 12651577 (+)
G1708495 NA other downstream 534083 12784207 ~ 12785502 (+)
LOC110490810 LOC106576597 other downstream 550644 12745000 ~ 12825754 (+)
G1708635 NA other downstream 701561 12951685 ~ 12952515 (+)

Expression


Co-expression Network