Gene
RNA
| Item | Value |
|---|---|
| gene id | G1708135 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 12333933 ~ 12342212 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1956609 | True | 841 | lncRNA | 0.42 | 3 | 12333933 | 12342212 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pphln1 | LOC106593546 | coding | upstream | 402680 | 11890730 ~ 11931253 (+) |
| LOC110515322 | LOC106576579 | coding | upstream | 536338 | 11724426 ~ 11797595 (+) |
| cntn1b | LOC106593403 | coding | upstream | 673382 | 11630432 ~ 11660551 (+) |
| nrcama | LOC105024872 | coding | upstream | 709722 | 11479780 ~ 11624211 (+) |
| LOC110503752 | LOC106576575 | coding | upstream | 865287 | 11432284 ~ 11468646 (+) |
| LOC118943005 | LOC106592567 | coding | downstream | 26657 | 12368869 ~ 12384112 (+) |
| LOC118942882 | LOC106609674 | coding | downstream | 49417 | 12391629 ~ 12421266 (+) |
| LOC110490813 | LOC106576520 | coding | downstream | 55588 | 12397800 ~ 12401053 (+) |
| LOC118936492 | LOC106609674 | coding | downstream | 66341 | 12408553 ~ 12415265 (+) |
| LOC110490708 | LOC106576521 | coding | downstream | 75224 | 12417436 ~ 12419416 (+) |
| G1707971 | NA | non-coding | upstream | 168632 | 12165035 ~ 12165301 (+) |
| G1707970 | NA | non-coding | upstream | 172063 | 12161533 ~ 12161870 (+) |
| G1707967 | NA | non-coding | upstream | 176978 | 12156247 ~ 12156955 (+) |
| G1707966 | NA | non-coding | upstream | 190145 | 12143427 ~ 12143788 (+) |
| G1707961 | NA | non-coding | upstream | 205764 | 12126428 ~ 12128169 (+) |
| G1708160 | NA | non-coding | downstream | 13166 | 12355378 ~ 12355813 (+) |
| G1708165 | NA | non-coding | downstream | 19258 | 12361470 ~ 12365511 (+) |
| G1708247 | NA | non-coding | downstream | 114640 | 12456852 ~ 12457169 (+) |
| G1708250 | NA | non-coding | downstream | 117755 | 12459967 ~ 12460208 (+) |
| G1708014 | NA | other | upstream | 83809 | 12248028 ~ 12250124 (+) |
| G1707772 | LOC106576513 | other | upstream | 469360 | 11863662 ~ 11864573 (+) |
| G1707462 | NA | other | upstream | 679310 | 11653901 ~ 11654623 (+) |
| G1707493 | LOC106609754 | other | upstream | 764977 | 11568429 ~ 11568956 (+) |
| G1706711 | NA | other | upstream | 934645 | 11398040 ~ 11399288 (+) |
| G1708323 | NA | other | downstream | 236396 | 12578608 ~ 12584156 (+) |
| G1708367 | NA | other | downstream | 307474 | 12649686 ~ 12651577 (+) |
| G1708495 | NA | other | downstream | 441995 | 12784207 ~ 12785502 (+) |
| LOC110490810 | LOC106576597 | other | downstream | 458556 | 12745000 ~ 12825754 (+) |
| G1708635 | NA | other | downstream | 609473 | 12951685 ~ 12952515 (+) |
