G1708165


Basic Information

Item Value
gene id G1708165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12361470 ~ 12365511 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956644
gggcctcccgggtggcgcagtggttaagggcgctgtactgcagcgccagctgtgccatcagagccctgggttcgcgcccaggctctgtcgtaaccggccgcgaccgggaggtccgtggggcgacgcacaattggcctagcgtcgcccgggttagggagggcttggtcggtaggggtgtccttgcgCACCagatcgcgcaccagcgactcctgtggcgggctgggctcagtgtacgctagccaaggtggccaggtgcacggtgtttcctccggcgcattggtgcggctggcttccgggttggatgtgcgctgtgttaaagattggttgtgtatcagaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactacaacaattggatactatgaaattggggagaaaaaggggtaaaattcaaaaaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956644 True 469 lncRNA 0.59 2 12361470 12365511

Neighbor

gene id symbol gene type direction distance location
pphln1 LOC106593546 coding upstream 430217 11890730 ~ 11931253 (+)
LOC110515322 LOC106576579 coding upstream 563875 11724426 ~ 11797595 (+)
cntn1b LOC106593403 coding upstream 700919 11630432 ~ 11660551 (+)
nrcama LOC105024872 coding upstream 737259 11479780 ~ 11624211 (+)
LOC110503752 LOC106576575 coding upstream 892824 11432284 ~ 11468646 (+)
LOC118943005 LOC106592567 coding downstream 3358 12368869 ~ 12384112 (+)
LOC118942882 LOC106609674 coding downstream 26118 12391629 ~ 12421266 (+)
LOC110490813 LOC106576520 coding downstream 32289 12397800 ~ 12401053 (+)
LOC118936492 LOC106609674 coding downstream 43042 12408553 ~ 12415265 (+)
LOC110490708 LOC106576521 coding downstream 51925 12417436 ~ 12419416 (+)
G1708160 NA non-coding upstream 5657 12355378 ~ 12355813 (+)
G1708135 NA non-coding upstream 19258 12333933 ~ 12342212 (+)
G1707971 NA non-coding upstream 196169 12165035 ~ 12165301 (+)
G1707970 NA non-coding upstream 199600 12161533 ~ 12161870 (+)
G1707967 NA non-coding upstream 204515 12156247 ~ 12156955 (+)
G1708247 NA non-coding downstream 91341 12456852 ~ 12457169 (+)
G1708250 NA non-coding downstream 94456 12459967 ~ 12460208 (+)
G1708257 NA non-coding downstream 102879 12468390 ~ 12468614 (+)
G1708268 NA non-coding downstream 118431 12483942 ~ 12484305 (+)
G1708014 NA other upstream 111346 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 496897 11863662 ~ 11864573 (+)
G1707462 NA other upstream 706847 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 792514 11568429 ~ 11568956 (+)
G1706711 NA other upstream 962182 11398040 ~ 11399288 (+)
G1708323 NA other downstream 213097 12578608 ~ 12584156 (+)
G1708367 NA other downstream 284175 12649686 ~ 12651577 (+)
G1708495 NA other downstream 418696 12784207 ~ 12785502 (+)
LOC110490810 LOC106576597 other downstream 435257 12745000 ~ 12825754 (+)
G1708635 NA other downstream 586174 12951685 ~ 12952515 (+)

Expression


Co-expression Network