G1708247


Basic Information

Item Value
gene id G1708247
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12456852 ~ 12457169 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956741
tgtttagtgagtccaccagatcagaggcagtagggatggccagggatgttctctgtttagtgagtccgccagatcagaggcagtagggatgatcagggatgttctctgtttagtgagtccaccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtccgccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtctgccagatcagaggcagtagggatgaccagggatgttctctgtttagtgagtccgccagatcagaggcagtagggatgaccagggatgttctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956741 True 318 lncRNA 0.52 1 12456852 12457169

Neighbor

gene id symbol gene type direction distance location
LOC110490703 LOC106594938 coding upstream 8544 12421633 ~ 12448308 (+)
LOC118942882 LOC106609674 coding upstream 35586 12391629 ~ 12421266 (+)
LOC110490708 LOC106576521 coding upstream 37436 12417436 ~ 12419416 (+)
LOC118936492 LOC106609674 coding upstream 41587 12408553 ~ 12415265 (+)
LOC110490813 LOC106576520 coding upstream 55799 12397800 ~ 12401053 (+)
LOC110490810 LOC106576597 coding downstream 287831 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 372000 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 385213 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 386934 12844103 ~ 12860368 (+)
cmas cmas coding downstream 410319 12867488 ~ 12885849 (+)
G1708165 NA non-coding upstream 91341 12361470 ~ 12365511 (+)
G1708160 NA non-coding upstream 101039 12355378 ~ 12355813 (+)
G1708135 NA non-coding upstream 114640 12333933 ~ 12342212 (+)
G1707971 NA non-coding upstream 291551 12165035 ~ 12165301 (+)
G1708250 NA non-coding downstream 2798 12459967 ~ 12460208 (+)
G1708257 NA non-coding downstream 11221 12468390 ~ 12468614 (+)
G1708268 NA non-coding downstream 26773 12483942 ~ 12484305 (+)
G1708271 NA non-coding downstream 30510 12487679 ~ 12488026 (+)
G1708276 NA non-coding downstream 37178 12494347 ~ 12494661 (+)
G1708014 NA other upstream 206728 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 592279 11863662 ~ 11864573 (+)
G1707462 NA other upstream 802229 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 887896 11568429 ~ 11568956 (+)
G1706711 NA other upstream 1057564 11398040 ~ 11399288 (+)
G1708323 NA other downstream 121439 12578608 ~ 12584156 (+)
G1708367 NA other downstream 192517 12649686 ~ 12651577 (+)
G1708495 NA other downstream 327038 12784207 ~ 12785502 (+)
G1708635 NA other downstream 494516 12951685 ~ 12952515 (+)

Expression


Co-expression Network