G1708257


Basic Information

Item Value
gene id G1708257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12468390 ~ 12468614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956751
cacaaacacatagccccttcaccaaaactagaccatacaaacacatagccccttcaccaaaactagaccacacaaacacatagccccttcaccaaaactagaccacacaaacacatagccccttcaccaaaactagaccatacaaacacatagccccttcaccaaaactagaccatacaaatacatagccccttcaccaaaactagaccacacaaacacatagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956751 True 225 lncRNA 0.44 1 12468390 12468614

Neighbor

gene id symbol gene type direction distance location
LOC110490703 LOC106594938 coding upstream 20082 12421633 ~ 12448308 (+)
LOC118942882 LOC106609674 coding upstream 47124 12391629 ~ 12421266 (+)
LOC110490810 LOC106576597 coding downstream 276386 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 360555 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 373768 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 375489 12844103 ~ 12860368 (+)
cmas cmas coding downstream 398874 12867488 ~ 12885849 (+)
G1708250 NA non-coding upstream 8182 12459967 ~ 12460208 (+)
G1708247 NA non-coding upstream 11221 12456852 ~ 12457169 (+)
G1708165 NA non-coding upstream 102879 12361470 ~ 12365511 (+)
G1708160 NA non-coding upstream 112577 12355378 ~ 12355813 (+)
G1708268 NA non-coding downstream 15328 12483942 ~ 12484305 (+)
G1708271 NA non-coding downstream 19065 12487679 ~ 12488026 (+)
G1708276 NA non-coding downstream 25733 12494347 ~ 12494661 (+)
G1708279 NA non-coding downstream 27368 12495982 ~ 12496220 (+)
G1708281 NA non-coding downstream 28402 12497016 ~ 12497371 (+)
G1708014 NA other upstream 218266 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 603817 11863662 ~ 11864573 (+)
G1707462 NA other upstream 813767 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 899434 11568429 ~ 11568956 (+)
G1706711 NA other upstream 1069102 11398040 ~ 11399288 (+)
G1708323 NA other downstream 109994 12578608 ~ 12584156 (+)
G1708367 NA other downstream 181072 12649686 ~ 12651577 (+)
G1708495 NA other downstream 315593 12784207 ~ 12785502 (+)
G1708635 NA other downstream 483071 12951685 ~ 12952515 (+)

Expression


Co-expression Network