G1708276


Basic Information

Item Value
gene id G1708276
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12494347 ~ 12494661 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956770
CATTATATCAGTGTCCAGGGGCAACTGCCTCCTCTCTGTGATGAGATGTCCCAGTTGTGCTGTTCATGCTGTTCCAATGATGTTCTAAAGGCAATAGAACACAGTCATGTGACTACCATTAAACAGTGATGATTCAGCGGAAGAGGTCTGCTTCGCGTTGGTGTTTGTAACTAGCAGGGAgaagtgactgagtgagtgggaTTTAGTGTTGTGAGTCATTGGCCATGTAggaatggcatcctattccctaatagtgcactacttatgaccaaagccctatgtgggccatggtcaaaagtagtgcacgacataGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956770 True 315 lncRNA 0.46 1 12494347 12494661

Neighbor

gene id symbol gene type direction distance location
LOC110490703 LOC106594938 coding upstream 46039 12421633 ~ 12448308 (+)
LOC118942882 LOC106609674 coding upstream 73081 12391629 ~ 12421266 (+)
LOC110490810 LOC106576597 coding downstream 250339 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 334508 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 347721 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 349442 12844103 ~ 12860368 (+)
cmas cmas coding downstream 372827 12867488 ~ 12885849 (+)
G1708271 NA non-coding upstream 6321 12487679 ~ 12488026 (+)
G1708268 NA non-coding upstream 10042 12483942 ~ 12484305 (+)
G1708257 NA non-coding upstream 25733 12468390 ~ 12468614 (+)
G1708250 NA non-coding upstream 34139 12459967 ~ 12460208 (+)
G1708247 NA non-coding upstream 37178 12456852 ~ 12457169 (+)
G1708279 NA non-coding downstream 1321 12495982 ~ 12496220 (+)
G1708281 NA non-coding downstream 2355 12497016 ~ 12497371 (+)
G1708282 NA non-coding downstream 3034 12497695 ~ 12498008 (+)
G1708286 NA non-coding downstream 9374 12504035 ~ 12510265 (+)
G1708285 NA non-coding downstream 16039 12510700 ~ 12514626 (+)
G1708014 NA other upstream 244223 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 629774 11863662 ~ 11864573 (+)
G1707462 NA other upstream 839724 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 925391 11568429 ~ 11568956 (+)
G1706711 NA other upstream 1095059 11398040 ~ 11399288 (+)
G1708323 NA other downstream 83947 12578608 ~ 12584156 (+)
G1708367 NA other downstream 155025 12649686 ~ 12651577 (+)
G1708495 NA other downstream 289546 12784207 ~ 12785502 (+)
G1708635 NA other downstream 457024 12951685 ~ 12952515 (+)

Expression


Co-expression Network