G1708282


Basic Information

Item Value
gene id G1708282
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 12497695 ~ 12498008 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1956776
TCAAAGAGAACAATTGCTTCCTTCATTCTTGCTGACATCATCATTATCCtgaaggttctctctctctctctgtagtgggTGTAGAGTCCCAAAAGATGAACTTCTGAGATTGAGGCAGAGAGTTTAACATAGGATATTGACATCTGATATTGAGATCGGGGCTGTTGACATCATACCTTTAGTGAAAGGTGTTTCAATGATGCTTCACTCATCTGTGGGGAGAAAAGAGAAAATGACTAGGACTTGACGTtgacgcacgcacgcgcacgcacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1956776 True 314 lncRNA 0.44 1 12497695 12498008

Neighbor

gene id symbol gene type direction distance location
LOC110490703 LOC106594938 coding upstream 49387 12421633 ~ 12448308 (+)
LOC118942882 LOC106609674 coding upstream 76429 12391629 ~ 12421266 (+)
LOC110490810 LOC106576597 coding downstream 246992 12745000 ~ 12825754 (+)
LOC110516535 LOC106576596 coding downstream 331161 12829169 ~ 12837237 (+)
LOC118943029 NA coding downstream 344374 12771599 ~ 12842545 (+)
LOC118942883 LOC106596479 coding downstream 346095 12844103 ~ 12860368 (+)
cmas cmas coding downstream 369480 12867488 ~ 12885849 (+)
G1708281 NA non-coding upstream 324 12497016 ~ 12497371 (+)
G1708279 NA non-coding upstream 1475 12495982 ~ 12496220 (+)
G1708276 NA non-coding upstream 3034 12494347 ~ 12494661 (+)
G1708271 NA non-coding upstream 9669 12487679 ~ 12488026 (+)
G1708268 NA non-coding upstream 13390 12483942 ~ 12484305 (+)
G1708286 NA non-coding downstream 6027 12504035 ~ 12510265 (+)
G1708285 NA non-coding downstream 12692 12510700 ~ 12514626 (+)
G1708295 NA non-coding downstream 23403 12521411 ~ 12521763 (+)
G1708301 NA non-coding downstream 27577 12525585 ~ 12526040 (+)
G1708304 NA non-coding downstream 46103 12544111 ~ 12544347 (+)
G1708014 NA other upstream 247571 12248028 ~ 12250124 (+)
G1707772 LOC106576513 other upstream 633122 11863662 ~ 11864573 (+)
G1707462 NA other upstream 843072 11653901 ~ 11654623 (+)
G1707493 LOC106609754 other upstream 928739 11568429 ~ 11568956 (+)
G1706711 NA other upstream 1098407 11398040 ~ 11399288 (+)
G1708323 NA other downstream 80600 12578608 ~ 12584156 (+)
G1708367 NA other downstream 151678 12649686 ~ 12651577 (+)
G1708495 NA other downstream 286199 12784207 ~ 12785502 (+)
G1708635 NA other downstream 453677 12951685 ~ 12952515 (+)

Expression


Co-expression Network